RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 MRPS31Q92665 395 aaKnown RBP4.01□□□□□ -1.77
VRK1-205ENST00000555402 FAF2Q96CS3 445 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 HAVCR1Q96D42 359 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 SLC25A38Q96DW6 304 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 IL4I1Q96RQ9 567 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 CCNL2Q96S94 520 aaPredicted RBP4.01□□□□□ -1.77
VRK1-205ENST00000555402 MCHR1Q99705 422 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 SLC39A3Q9BRY0 314 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 NIPSNAP3BQ9BS92 247 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 PAXXQ9BUH6 204 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 ZNF275Q9NSD4 429 aaPredicted RBP4.01□□□□□ -1.77
VRK1-205ENST00000555402 NUDT15Q9NV35 164 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 PHF11Q9UIL8 331 aa4.01□□□□□ -1.77
VRK1-205ENST00000555402 CLSPNQ9HAW4 1339 aa4□□□□□ -1.77
VRK1-205ENST00000555402 A0A1W2PQ72 361 aa4□□□□□ -1.77
VRK1-205ENST00000555402 VSTM2BA6NLU5 285 aa4□□□□□ -1.77
VRK1-205ENST00000555402 WWP2O00308 870 aa4□□□□□ -1.77
VRK1-205ENST00000555402 CDX4O14627 284 aaPredicted RBP4□□□□□ -1.77
VRK1-205ENST00000555402 RGS16O15492 202 aaPredicted RBP4□□□□□ -1.77
VRK1-205ENST00000555402 DIRAS1O95057 198 aa4□□□□□ -1.77
VRK1-205ENST00000555402 OR8U8P0C7N1 319 aa4□□□□□ -1.77
VRK1-205ENST00000555402 POU2F1P14859 743 aa4□□□□□ -1.77
VRK1-205ENST00000555402 GCFC2P16383 781 aaKnown RBP4□□□□□ -1.77
VRK1-205ENST00000555402 NMT1P30419 496 aaKnown RBP4□□□□□ -1.77
VRK1-205ENST00000555402 PEX19P40855 299 aa4□□□□□ -1.77
VRK1-205ENST00000555402 LEPP41159 167 aa4□□□□□ -1.77
VRK1-205ENST00000555402 MAGEA8P43361 318 aa4□□□□□ -1.77
VRK1-205ENST00000555402 OR3A4PP47883 348 aa4□□□□□ -1.77
VRK1-205ENST00000555402 CCT3P49368 545 aaKnown RBP4□□□□□ -1.77
VRK1-205ENST00000555402 DAP3P51398 398 aaKnown RBP4□□□□□ -1.77
VRK1-205ENST00000555402 P2RY4P51582 365 aa4□□□□□ -1.77
VRK1-205ENST00000555402 DDX39BQ13838 428 aaKnown RBP4□□□□□ -1.77
VRK1-205ENST00000555402 RABL6Q3YEC7 729 aaPredicted RBP4□□□□□ -1.77
VRK1-205ENST00000555402 FILIP1LQ4L180 1135 aa4□□□□□ -1.77
VRK1-205ENST00000555402 PDZK1Q5T2W1 519 aa4□□□□□ -1.77
VRK1-205ENST00000555402 PAMR1Q6UXH9 720 aa4□□□□□ -1.77
VRK1-205ENST00000555402 BAIAP2L2Q6UXY1 529 aa4□□□□□ -1.77
VRK1-205ENST00000555402 FRA10AC1Q70Z53 315 aa4□□□□□ -1.77
VRK1-205ENST00000555402 MOB1BQ7L9L4 216 aa4□□□□□ -1.77
VRK1-205ENST00000555402 NBPF5PQ86XG9 351 aaPredicted RBP4□□□□□ -1.77
VRK1-205ENST00000555402 OR8J1Q8NGP2 316 aa4□□□□□ -1.77
VRK1-205ENST00000555402 OR13F1Q8NGS4 319 aa4□□□□□ -1.77
VRK1-205ENST00000555402 EFHD2Q96C19 240 aaPredicted RBP4□□□□□ -1.77
VRK1-205ENST00000555402 SERAC1Q96JX3 654 aa4□□□□□ -1.77
VRK1-205ENST00000555402 KIR2DL4Q99706 377 aa4□□□□□ -1.77
VRK1-205ENST00000555402 DEFB126Q9BYW3 111 aa4□□□□□ -1.77
VRK1-205ENST00000555402 ISG20L2Q9H9L3 353 aaKnown RBP4□□□□□ -1.77
VRK1-205ENST00000555402 POPDC2Q9HBU9 364 aa4□□□□□ -1.77
VRK1-205ENST00000555402 APOBEC3BQ9UH17 382 aaKnown RBP4□□□□□ -1.77
VRK1-205ENST00000555402 KLHL21Q9UJP4 597 aa4□□□□□ -1.77
VRK1-205ENST00000555402 PRPF19Q9UMS4 504 aaKnown RBP4□□□□□ -1.77
VRK1-205ENST00000555402 POLDIP2Q9Y2S7 368 aa4□□□□□ -1.77
VRK1-205ENST00000555402 PNPLA6Q8IY17 1366 aa4□□□□□ -1.77
VRK1-205ENST00000555402 RPAP1Q9BWH6 1393 aaPredicted RBP4□□□□□ -1.77
VRK1-205ENST00000555402 ZNF705EA8MWA4 302 aaPredicted RBP3.99□□□□□ -1.77
VRK1-205ENST00000555402 F5H6K3 240 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 MED7O43513 233 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 PFKFB2O60825 505 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 TBL1XO60907 577 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 ATP5LO75964 103 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 LALBAP00709 142 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 NTSP30990 170 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 SSR1P43307 286 aaKnown RBP3.99□□□□□ -1.77
VRK1-205ENST00000555402 KIR2DS2P43631 304 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 EFNB2P52799 333 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 CHRNB3Q05901 458 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 KLRC3Q07444 240 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 ZNF239Q16600 458 aaKnown RBP3.99□□□□□ -1.77
VRK1-205ENST00000555402 SBK1Q52WX2 424 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 BOLA3Q53S33 107 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 DMRTC1Q5HYR2 192 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 TRPM8Q7Z2W7 1104 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 ZNF677Q86XU0 584 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 ZBED8Q8IZ13 594 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 LRRC75A-AS1Q8N1F1 130 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 ZNF525Q8N782 197 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 MFSD9Q8NBP5 474 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 PAQR8Q8TEZ7 354 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 SCFD1Q8WVM8 642 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 FGGYQ96C11 551 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 TCEANC2Q96MN5 208 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 COPS8Q99627 209 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 NMUR2Q9GZQ4 415 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 Q9H3A6 140 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 FN3KRPQ9HA64 309 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 B3GNT2Q9NY97 397 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 ADAM28Q9UKQ2 775 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 NAP1L2Q9ULW6 460 aaPredicted RBP3.99□□□□□ -1.77
VRK1-205ENST00000555402 UBQLN1Q9UMX0 589 aaKnown RBP3.99□□□□□ -1.77
VRK1-205ENST00000555402 COPS3Q9UNS2 423 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 ERVW-1Q9UQF0 538 aa3.99□□□□□ -1.77
VRK1-205ENST00000555402 A0A1B0GUS0 222 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 A0A1B0GVL5 298 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 A0A1B0GWB2 263 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 TMEM110-MUSTN1A8MSY1 372 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 TRDCB7Z8K6 153 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 UBXN8O00124 270 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 HIP1O00291 1037 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 PHOX2AO14813 284 aa3.98□□□□□ -1.77
VRK1-205ENST00000555402 CXCL13O43927 109 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms