RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ERV3-1Q14264 604 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 SF3B4Q15427 424 aaKnown RBP eCLIP10.27□□□□□ -0.77
SRP54-205ENST00000554803 SF1Q15637 639 aaKnown RBP10.27□□□□□ -0.77
SRP54-205ENST00000554803 SNAPC1Q16533 368 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 DECR1Q16698 335 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 TBRG1Q3YBR2 411 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 EIPR1Q53HC9 387 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 CCNJQ5T5M9 372 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 LIPKQ5VXJ0 399 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 OR4C11Q6IEV9 310 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 ADNP2Q6IQ32 1131 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 TNFAIP8L2Q6P589 184 aaPredicted RBP10.27□□□□□ -0.77
SRP54-205ENST00000554803 PODNL1Q6PEZ8 512 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 ZNF767PQ75MW2 155 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 LAX1Q8IWV1 398 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 MCEMP1Q8IX19 187 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 KLHL36Q8N4N3 616 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 ESX1Q8N693 406 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 CELF2-AS1Q8N7Q2 184 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 AVL9Q8NBF6 648 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 OTULINQ96BN8 352 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 ARHGDIGQ99819 225 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 MENTQ9BUN1 341 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 SLC35C2Q9NQQ7 365 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 ZNF275Q9NSD4 429 aaPredicted RBP10.27□□□□□ -0.77
SRP54-205ENST00000554803 LYARQ9NX58 379 aaKnown RBP10.27□□□□□ -0.77
SRP54-205ENST00000554803 ING3Q9NXR8 418 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 TVP23BQ9NYZ1 205 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 CBLCQ9ULV8 474 aa10.27□□□□□ -0.77
SRP54-205ENST00000554803 EXOGQ9Y2C4 368 aaKnown RBP10.27□□□□□ -0.77
SRP54-205ENST00000554803 SPIN1Q9Y657 262 aaPredicted RBP10.27□□□□□ -0.77
SRP54-205ENST00000554803 A0A0A6YYD5 115 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 A0A1W2PQL4 384 aaPredicted RBP10.26□□□□□ -0.77
SRP54-205ENST00000554803 B4DXG7 233 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 ITGA10O75578 1167 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 ALX3O95076 343 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 IGHA1P01876 353 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 CSF3P09919 207 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 FUT4P22083 530 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 MMP11P24347 488 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 GPC1P35052 558 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 SOX3P41225 446 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 FASLGP48023 281 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 MTNR1BP49286 362 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 RNF144AP50876 292 aaPredicted RBP10.26□□□□□ -0.77
SRP54-205ENST00000554803 PGDP52209 483 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 TAS2R43P59537 309 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 GNG2P59768 71 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 SLC9A5Q14940 896 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 ZNF311Q5JNZ3 666 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 BAIAP2L2Q6UXY1 529 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 RRM2BQ7LG56 351 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 ZER1Q7Z7L7 766 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 TPRA1Q86W33 373 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 ADGRF3Q8IZF5 1079 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 C2orf73Q8N5S3 287 aaPredicted RBP10.26□□□□□ -0.77
SRP54-205ENST00000554803 ANKK1Q8NFD2 765 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 SLC37A2Q8TED4 501 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 ACOT11Q8WXI4 607 aaPredicted RBP10.26□□□□□ -0.77
SRP54-205ENST00000554803 CREB3L1Q96BA8 519 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 RNFT2Q96EX2 444 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 AMDHD1Q96NU7 426 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 BBS4Q96RK4 519 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 KATNB1Q9BVA0 655 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 OR51I1Q9H343 314 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 XKR8Q9H6D3 395 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 RNF167Q9H6Y7 350 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 ABCB9Q9NP78 766 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 ZCCHC3Q9NUD5 404 aaKnown RBP10.26□□□□□ -0.77
SRP54-205ENST00000554803 C14orf119Q9NWQ9 140 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 FBXW2Q9UKT8 454 aa10.26□□□□□ -0.77
SRP54-205ENST00000554803 SF3B6Q9Y3B4 125 aaKnown RBP10.26□□□□□ -0.77
SRP54-205ENST00000554803 IGHV1OR21-1A0A087WYE8 117 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 OR5K4A6NMS3 321 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 EMC8O43402 210 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 C1QBP02746 253 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 MSL3P1P0C860 447 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 SLC2A2P11168 524 aaPredicted RBP10.25□□□□□ -0.77
SRP54-205ENST00000554803 TNNI3P19429 210 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 CSNK2A2P19784 350 aaPredicted RBP10.25□□□□□ -0.77
SRP54-205ENST00000554803 HTR1FP30939 366 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 MPIP34949 423 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 DLSTP36957 453 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 SSR2P43308 183 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 GAS1P54826 345 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 TAS2R41P59536 307 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 UBE2IP63279 158 aaKnown RBP10.25□□□□□ -0.77
SRP54-205ENST00000554803 TNK1Q13470 666 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 TSTA3Q13630 321 aaPredicted RBP10.25□□□□□ -0.77
SRP54-205ENST00000554803 CEBPEQ15744 281 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 PYDC2Q56P42 97 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 NKAIN2Q5VXU1 208 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 NXNL2Q5VZ03 156 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 CDC73Q6P1J9 531 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 TMEM71Q6P5X7 295 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 PAMR1Q6UXH9 720 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 CREB3L2Q70SY1 520 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 GPALPP1Q8IXQ4 340 aa10.25□□□□□ -0.77
SRP54-205ENST00000554803 RNF113BQ8IZP6 322 aaKnown RBP10.25□□□□□ -0.77
SRP54-205ENST00000554803 Q8NA96 180 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms