RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 A8MVJ9 347 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 TO15178 435 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 GCM2O75603 506 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-212ENST00000554486 KCNK2O95069 426 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 AGR2O95994 175 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 IGKV1D-16P01601 117 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 MT-ND5P03915 603 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 CHRM4P08173 479 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 TFPTP0C1Z6 253 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 ICAM2P13598 275 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 HSD17B1P14061 328 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 TCN1P20061 433 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-212ENST00000554486 ITPKBP27987 946 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 HTR1EP28566 365 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 PCGF2P35227 344 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 PIGAP37287 484 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 NR0B1P51843 470 aaKnown RBP5.76□□□□□ -1.49
SCFD1-212ENST00000554486 DCAF7P61962 342 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 KCNJ2P63252 427 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 MRPS22P82650 360 aaKnown RBP5.76□□□□□ -1.49
SCFD1-212ENST00000554486 TLE3Q04726 772 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 CHAF1BQ13112 559 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 AIMP2Q13155 320 aaKnown RBP5.76□□□□□ -1.49
SCFD1-212ENST00000554486 SYPL1Q16563 259 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 CYP51A1Q16850 503 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 ARHGAP11BQ3KRB8 267 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 PLA1AQ53H76 456 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 CCNJQ5T5M9 372 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 H3F3CQ6NXT2 135 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 ZNF627Q7L945 461 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 OLIG3Q7RTU3 272 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 IFNEQ86WN2 208 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 HPS6Q86YV9 775 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 MICU2Q8IYU8 434 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 PRR22Q8IZ63 422 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 ARHGAP24Q8N264 748 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 FBXW8Q8N3Y1 598 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 LNX2Q8N448 690 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 ANKFN1Q8N957 763 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 CHDHQ8NE62 594 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-212ENST00000554486 C17orf47Q8NEP4 570 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 OR2T12Q8NG77 320 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 OR5L2Q8NGL0 311 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 NFKBIDQ8NI38 313 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 GPR151Q8TDV0 419 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 SLC38A5Q8WUX1 472 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 PSMF1Q92530 271 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 RMND5BQ96G75 393 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-212ENST00000554486 TMEM19Q96HH6 336 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 REXO5Q96IC2 774 aaKnown RBP5.76□□□□□ -1.49
SCFD1-212ENST00000554486 THOC3Q96J01 351 aaKnown RBP5.76□□□□□ -1.49
SCFD1-212ENST00000554486 SNX22Q96L94 193 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 SGCZQ96LD1 299 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 FER1L6-AS2Q96M78 137 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 SDF2Q99470 211 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 RSPO3Q9BXY4 272 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-212ENST00000554486 DEFB126Q9BYW3 111 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 SLC38A1Q9H2H9 487 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 TMEM38AQ9H6F2 299 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 P2RX2Q9UBL9 471 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 CFL2Q9Y281 166 aa5.76□□□□□ -1.49
SCFD1-212ENST00000554486 MAP1BP46821 2468 aaKnown RBP5.75□□□□□ -1.49
SCFD1-212ENST00000554486 TRGV11A0A075B6L2 103 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 A0A087WV48 116 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 ELOVL7A1L3X0 281 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 ARGFXA6NJG6 315 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 A8MUI8 341 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 VWC2LB2RUY7 222 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 ANKRD65E5RJM6 399 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 F5H697 171 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 NPIPB9F8W1W9 429 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 K7ENP7 123 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 WWP2O00308 870 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 ACOT8O14734 319 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 ACOX3O15254 700 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 RRP8O43159 456 aaKnown RBP5.75□□□□□ -1.49
SCFD1-212ENST00000554486 SLC28A2O43868 658 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 TSPAN2O60636 221 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 FCMRO60667 390 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 OR2J2O76002 312 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 SOX30O94993 753 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 PGM3O95394 542 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 H6PDO95479 791 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 AK1P00568 194 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 BCHEP06276 602 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 NR2F1P10589 423 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 NQO1P15559 274 aaKnown RBP5.75□□□□□ -1.49
SCFD1-212ENST00000554486 PPP3CBP16298 524 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 NCK1P16333 377 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 ME2P23368 584 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 TNFSF4P23510 183 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 ABCD3P28288 659 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 HTR3AP46098 478 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 CRYBA2P53672 197 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 LOXL3P58215 753 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 MLF1P58340 268 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 CDK6Q00534 326 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 MS4A2Q01362 244 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 RBBP4Q09028 425 aa5.75□□□□□ -1.49
SCFD1-212ENST00000554486 SCARB2Q14108 478 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms