RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 OR8D2Q9GZM6 311 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 NRSN2Q9GZP1 204 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 ENKD1Q9H0I2 346 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 SNTG1Q9NSN8 517 aa10.78□□□□□ -0.68
SHMT2-212ENST00000554467 C17orf105B2RV13 164 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 B4DXG7 233 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 ZNF749O43361 778 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 CSTF2P33240 577 aaKnown RBP eCLIP10.77□□□□□ -0.68
SHMT2-212ENST00000554467 MAP3K8P41279 467 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 ZNHIT3Q15649 155 aaPredicted RBP10.77□□□□□ -0.68
SHMT2-212ENST00000554467 BTBD16Q32M84 506 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 FCRLBQ6BAA4 426 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 LAPTM4BQ86VI4 370 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 GLCCI1Q86VQ1 547 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 PRR22Q8IZ63 422 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 OR6C4Q8NGE1 309 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 ACOT11Q8WXI4 607 aaPredicted RBP10.77□□□□□ -0.68
SHMT2-212ENST00000554467 PIGKQ92643 395 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 ELF4Q99607 663 aaPredicted RBP10.77□□□□□ -0.68
SHMT2-212ENST00000554467 BARHL1Q9BZE3 327 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 DUSP15Q9H1R2 295 aaPredicted RBP10.77□□□□□ -0.68
SHMT2-212ENST00000554467 OR10A5Q9H207 317 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 NLGN3Q9NZ94 848 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 TEKT2Q9UIF3 430 aa10.77□□□□□ -0.68
SHMT2-212ENST00000554467 A0A1W2PPC1 479 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 A0A1W2PQ09 198 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 DUX1O43812 170 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 NKX2-2O95096 273 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 IL32P24001 234 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 SOX6P35712 828 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 RPS5P46782 204 aaKnown RBP10.77□□□□□ -0.69
SHMT2-212ENST00000554467 HSD11B2P80365 405 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 GRM7Q14831 915 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 SYT14P1Q58G82 188 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 EXOSC6Q5RKV6 272 aaKnown RBP10.77□□□□□ -0.69
SHMT2-212ENST00000554467 SLC35F1Q5T1Q4 408 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 LYSMD4Q5XG99 296 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 RANBP3LQ86VV4 465 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-212ENST00000554467 ZNF595Q8IYB9 648 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 KBTBD8Q8NFY9 601 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 NLGN4YQ8NFZ3 816 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-212ENST00000554467 OR4Q3Q8NH05 313 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 OR4C3Q8NH37 302 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 SAMD8Q96LT4 415 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 STACQ99469 402 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 PCED1AQ9H1Q7 454 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 UCK1Q9HA47 277 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 FAM183AA6NL82 134 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 C17orf51A8MQB3 221 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 CT45A8P0DMV1 189 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 CT45A9P0DMV2 189 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 MAKP20794 623 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 GPR3P46089 330 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 CSTF1Q05048 431 aaKnown RBP10.77□□□□□ -0.69
SHMT2-212ENST00000554467 CT45A2Q5DJT8 189 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 FAM122CQ6P4D5 195 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 GUSBP11Q6P575 273 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 TCTE3Q8IZS6 198 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 OR8J1Q8NGP2 316 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 GNPDA2Q8TDQ7 276 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 MARVELD3Q96A59 401 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 TMCO6Q96DC7 493 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 PRSS27Q9BQR3 290 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 CSNK1G3Q9Y6M4 447 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 ADAMTS9Q9P2N4 1935 aa10.77□□□□□ -0.69
SHMT2-212ENST00000554467 TECTAO75443 2155 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 PATE3B3GLJ2 98 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 LRRTM2O43300 516 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 NUDT21O43809 227 aaKnown RBP10.76□□□□□ -0.69
SHMT2-212ENST00000554467 CFIP05156 583 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 GLB1P16278 677 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 ERP29P30040 261 aaKnown RBP10.76□□□□□ -0.69
SHMT2-212ENST00000554467 CSNK2BP67870 215 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 TSPAN31Q12999 210 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 TBCEQ15813 527 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-212ENST00000554467 LPAL2Q16609 132 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 PLAG1Q6DJT9 500 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 RDH10Q8IZV5 341 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 BBS1Q8NFJ9 593 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 SETD6Q8TBK2 473 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 LRRC20Q8TCA0 184 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 UBASH3BQ8TF42 649 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 FCGR1BQ92637 280 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 DNAJA3Q96EY1 480 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 ZNF285Q96NJ3 590 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 GAL3ST4Q96RP7 486 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 SMAD5Q99717 465 aaKnown RBP10.76□□□□□ -0.69
SHMT2-212ENST00000554467 KCNN2Q9H2S1 579 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 SLC25A19Q9HC21 320 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 RFPL3O75679 317 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 RPS4Y1P22090 263 aaKnown RBP10.76□□□□□ -0.69
SHMT2-212ENST00000554467 KIR2DL3P43628 341 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 SKP1P63208 163 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 COX10Q12887 443 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 EIPR1Q53HC9 387 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 TCTE1Q5JU00 501 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 ARMC4Q5T2S8 1044 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 SLC27A4Q6P1M0 643 aa10.76□□□□□ -0.69
SHMT2-212ENST00000554467 SENP5Q96HI0 755 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-212ENST00000554467 ZNF582Q96NG8 517 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms