RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 DHDDSQ86SQ9 333 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 GTF2IRD2Q86UP8 949 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 FUNDC1Q8IVP5 155 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 MARVELD2Q8N4S9 558 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 ANKFN1Q8N957 763 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 PCYOX1LQ8NBM8 494 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 OR5M1Q8NGP8 315 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 OR52P1PQ8NH57 321 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 LILRB4Q8NHJ6 448 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 BBS10Q8TAM1 723 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 ST8SIA1Q92185 356 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 AURKBQ96GD4 344 aaPredicted RBP7.52□□□□□ -1.21
PSEN1-209ENST00000553855 MRGPRX4Q96LA9 322 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 RNF145Q96MT1 663 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 ZNF607Q96SK3 696 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 TUBA1CQ9BQE3 449 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 THUMPD3Q9BV44 507 aaKnown RBP7.52□□□□□ -1.21
PSEN1-209ENST00000553855 PINK1Q9BXM7 581 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 RTN4RQ9BZR6 473 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 PAIP1Q9H074 479 aaKnown RBP7.52□□□□□ -1.21
PSEN1-209ENST00000553855 FANCFQ9NPI8 374 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 GID8Q9NWU2 228 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 PRR13Q9NZ81 148 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 ZNF629Q9UEG4 869 aaPredicted RBP7.52□□□□□ -1.21
PSEN1-209ENST00000553855 CAPN7Q9Y6W3 813 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 POLEQ07864 2286 aa7.52□□□□□ -1.21
PSEN1-209ENST00000553855 ZGRF1Q86YA3 2104 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 A0A0G2JNJ9 132 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 MBD3L4A6NDZ8 208 aaPredicted RBP7.51□□□□□ -1.21
PSEN1-209ENST00000553855 MBD3L3A6NE82 208 aaPredicted RBP7.51□□□□□ -1.21
PSEN1-209ENST00000553855 AGAP5A6NIR3 686 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 MBD3L5A6NJ08 208 aaPredicted RBP7.51□□□□□ -1.21
PSEN1-209ENST00000553855 EEF1E1-BLOC1S5C9J1V9 151 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 NPIPB9F8W1W9 429 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 SLC22A2O15244 555 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 EEF1E1O43324 174 aaKnown RBP7.51□□□□□ -1.21
PSEN1-209ENST00000553855 SERPINB7O75635 380 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 DNAJC8O75937 253 aaPredicted RBP7.51□□□□□ -1.21
PSEN1-209ENST00000553855 CAPN3P20807 821 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 BMP5P22003 454 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 SLC6A2P23975 617 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 FKBP2P26885 142 aaKnown RBP7.51□□□□□ -1.21
PSEN1-209ENST00000553855 CEACAM8P31997 349 aaPredicted RBP7.51□□□□□ -1.21
PSEN1-209ENST00000553855 RYKP34925 604 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 HTR3AP46098 478 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 CPA2P48052 419 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 CLDN18P56856 261 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 CARD18P57730 90 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 B3GALT5-AS1P59052 145 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 MERTKQ12866 999 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 FOXF1Q12946 379 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 SELENBP1Q13228 472 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 QPRTQ15274 297 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 CYP51A1Q16850 503 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 PLPPR5Q32ZL2 321 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 GTDC1Q4AE62 458 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 ZNF311Q5JNZ3 666 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 DCST1Q5T197 706 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 PRAMEF8Q5VWM4 474 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 PRAMEF7Q5VXH5 474 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 HBMQ6B0K9 141 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 RTL6Q6ICC9 239 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 CDPF1Q6NVV7 123 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 C3orf33Q6P1S2 294 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 CBLN3Q6UW01 205 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 SHISA2Q6UWI4 295 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 Q6ZS46 218 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 ZNF550Q7Z398 422 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 LILRA2Q8N149 483 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 RPRMLQ8N4K4 120 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 ATP6V1C2Q8NEY4 427 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 OR2V1Q8NHB1 315 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 MBD3L2Q8NHZ7 208 aaPredicted RBP7.51□□□□□ -1.21
PSEN1-209ENST00000553855 GPR119Q8TDV5 335 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 ZHX1-C8orf76Q96EF9 292 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 ARSGQ96EG1 525 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 TMEM19Q96HH6 336 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 KLHL15Q96M94 604 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 SFXN3Q9BWM7 321 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 FAM107BQ9H098 131 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 SLC38A1Q9H2H9 487 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 A4GALTQ9NPC4 353 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 EXOSC3Q9NQT5 275 aaKnown RBP7.51□□□□□ -1.21
PSEN1-209ENST00000553855 KLHL28Q9NXS3 571 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 Q9UFV3 132 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 PRDM4Q9UKN5 801 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 ICAM5Q9UMF0 924 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 ANGPT4Q9Y264 503 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 L3MBTL1Q9Y468 752 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 ZNF175Q9Y473 711 aa7.51□□□□□ -1.21
PSEN1-209ENST00000553855 TEP1Q99973 2627 aaKnown RBP7.5□□□□□ -1.21
PSEN1-209ENST00000553855 PRORSD1PA6NEY8 169 aa7.5□□□□□ -1.21
PSEN1-209ENST00000553855 CFAP73A6NFT4 308 aa7.5□□□□□ -1.21
PSEN1-209ENST00000553855 ALX3O95076 343 aa7.5□□□□□ -1.21
PSEN1-209ENST00000553855 RCBTB2O95199 551 aa7.5□□□□□ -1.21
PSEN1-209ENST00000553855 IL18BPO95998 194 aa7.5□□□□□ -1.21
PSEN1-209ENST00000553855 NPPAP01160 153 aa7.5□□□□□ -1.21
PSEN1-209ENST00000553855 CRHP06850 196 aa7.5□□□□□ -1.21
PSEN1-209ENST00000553855 CHRM4P08173 479 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms