RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 TSPAN31Q12999 210 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 INPP5JQ15735 1006 aaPredicted RBP12.5□□□□□ -0.41
APEX1-205ENST00000553555 ELOA3BQ3SY89 546 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 USP51Q70EK9 711 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 MEX3DQ86XN8 651 aaKnown RBP12.5□□□□□ -0.41
APEX1-205ENST00000553555 MARVELD2Q8N4S9 558 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 FADS6Q8N9I5 356 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 ELOA3Q8NG57 546 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 OR2M3Q8NG83 312 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 SNIP1Q8TAD8 396 aaKnown RBP12.5□□□□□ -0.41
APEX1-205ENST00000553555 FAM46AQ96IP4 442 aaKnown RBP12.5□□□□□ -0.41
APEX1-205ENST00000553555 UTP23Q9BRU9 249 aaKnown RBP12.5□□□□□ -0.41
APEX1-205ENST00000553555 KRCC1Q9NPI7 259 aaPredicted RBP12.5□□□□□ -0.41
APEX1-205ENST00000553555 SACM1LQ9NTJ5 587 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 LRFN1Q9P244 771 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 ENOPH1Q9UHY7 261 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 OSGIN1Q9UJX0 560 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 NCKAP5O14513 1909 aa12.5□□□□□ -0.41
APEX1-205ENST00000553555 FREM2Q5SZK8 3169 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 A6NL46 340 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 GNB5O14775 395 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 SNX4O95219 450 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 CLIC3O95833 236 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 WDPCPO95876 746 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 GNAO1P09471 354 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 IFI30P13284 250 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 MYF6P23409 242 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 FPR3P25089 353 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 EPHA2P29317 976 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 CASRP41180 1078 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 DLX5P56178 289 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 ESRRGP62508 458 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 TUBA3CQ13748 450 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 AGAP7PQ5VUJ5 663 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 TUBA3EQ6PEY2 450 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 ISLR2Q6UXK2 745 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 LINC00696Q6ZRV3 163 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 GRINAQ7Z429 371 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 PLCZ1Q86YW0 608 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 CDK20Q8IZL9 346 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 PSD4Q8NDX1 1056 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 TMEM234Q8WY98 164 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 ST8SIA1Q92185 356 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 CNBD2Q96M20 576 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 AGAP4Q96P64 663 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 TMEM43Q9BTV4 400 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 C20orf141Q9NUB4 165 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 GPR83Q9NYM4 423 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 UBAP1Q9NZ09 502 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 TMEM5Q9Y2B1 443 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 SSUH2Q9Y2M2 353 aa12.49□□□□□ -0.41
APEX1-205ENST00000553555 URB1O60287 2271 aaKnown RBP12.49□□□□□ -0.41
APEX1-205ENST00000553555 CEP295Q9C0D2 2601 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 IGKV1D-42A0A075B6H8 117 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 ETV2O00321 342 aaPredicted RBP12.48□□□□□ -0.41
APEX1-205ENST00000553555 KPNA4O00629 521 aaPredicted RBP12.48□□□□□ -0.41
APEX1-205ENST00000553555 SNPHO15079 494 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 NEURL1O76050 574 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 WISP1O95388 367 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 F10P00742 488 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 PRKCAP17252 672 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 MAKP20794 623 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 GPR4P46093 362 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 HTR3AP46098 478 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 CCL11P51671 97 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 POLR2HP52434 150 aaKnown RBP12.48□□□□□ -0.41
APEX1-205ENST00000553555 CRISP1P54107 249 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 ALDH6A1Q02252 535 aaKnown RBP12.48□□□□□ -0.41
APEX1-205ENST00000553555 RAPSNQ13702 412 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 PDK3Q15120 406 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 DEFB109BQ30KR1 87 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 SPINK14Q6IE38 97 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 ARSKQ6UWY0 536 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 TMPRSS11FQ6ZWK6 438 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 P3H2Q8IVL5 708 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 OR4K17Q8NGC6 315 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 BPIFA2Q96DR5 249 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 TMEM41AQ96HV5 264 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 MUS81Q96NY9 551 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 SLC19A3Q9BZV2 496 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 ZNF552Q9H707 407 aaPredicted RBP12.48□□□□□ -0.41
APEX1-205ENST00000553555 TIMMDC1Q9NPL8 285 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 MED17Q9NVC6 651 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 PLA2G3Q9NZ20 509 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 FBXL2Q9UKC9 423 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 NDRG4Q9ULP0 352 aaKnown RBP12.48□□□□□ -0.41
APEX1-205ENST00000553555 PCDHGB6Q9Y5F9 930 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 G3V3Y1 287 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 CDC42EP2O14613 210 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 BCKDKO14874 412 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 TRIM3O75382 744 aaPredicted RBP12.48□□□□□ -0.41
APEX1-205ENST00000553555 IGFBP1P08833 259 aaPredicted RBP12.48□□□□□ -0.41
APEX1-205ENST00000553555 CNR1P21554 472 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 CHMP24386 653 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 CXCR1P25024 350 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 ID4P47928 161 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 CRYZQ08257 329 aaKnown RBP12.48□□□□□ -0.41
APEX1-205ENST00000553555 KEAP1Q14145 624 aa12.48□□□□□ -0.41
APEX1-205ENST00000553555 SLC25A53Q5H9E4 307 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms