RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 PLET1Q6UQ28 207 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 THSD4Q6ZMP0 1018 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 PARGQ86W56 976 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 SYS1Q8N2H4 156 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 C7orf57Q8NEG2 295 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 OR6C4Q8NGE1 309 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 NACC2Q96BF6 587 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 TCTN2Q96GX1 697 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 NEDD4LQ96PU5 975 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 TIMP4Q99727 224 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 MFRPQ9BY79 579 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 ISG20L2Q9H9L3 353 aaKnown RBP11.9□□□□□ -0.5
SHMT2-205ENST00000553474 C2orf42Q9NWW7 574 aa11.9□□□□□ -0.5
SHMT2-205ENST00000553474 FAM172BPA6NC97 362 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 B4DXG7 233 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 PLA2G10O15496 165 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 HPGDSO60760 199 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 RDH16O75452 317 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 SC5DO75845 299 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 NDUFB2O95178 105 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 NSA2O95478 260 aaKnown RBP11.9□□□□□ -0.51
SHMT2-205ENST00000553474 THEGLP0DJG4 465 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 NOS3P29474 1203 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 RBMS1P29558 406 aaKnown RBP11.9□□□□□ -0.51
SHMT2-205ENST00000553474 MAP2K3P46734 347 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 FASLGP48023 281 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 ATP12AP54707 1039 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 RPS7P62081 194 aaKnown RBP11.9□□□□□ -0.51
SHMT2-205ENST00000553474 DAB2P98082 770 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 LGALS3BPQ08380 585 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 IL18Q14116 193 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 FZD2Q14332 565 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 CARTPTQ16568 116 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 KLHL12Q53G59 568 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 ATAD3CQ5T2N8 411 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 VASH1Q7L8A9 365 aaPredicted RBP11.9□□□□□ -0.51
SHMT2-205ENST00000553474 ZNF438Q7Z4V0 828 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 PXKQ7Z7A4 578 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 MCATQ8IVS2 390 aaKnown RBP11.9□□□□□ -0.51
SHMT2-205ENST00000553474 TMEFF1Q8IYR6 380 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 OR10H4Q8NGA5 316 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 OR5M3Q8NGP4 307 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 ZDHHC1Q8WTX9 485 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 CNOT9Q92600 299 aaKnown RBP11.9□□□□□ -0.51
SHMT2-205ENST00000553474 TMEM43Q9BTV4 400 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 TRAF4Q9BUZ4 470 aaPredicted RBP11.9□□□□□ -0.51
SHMT2-205ENST00000553474 CHRNA10Q9GZZ6 450 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 RNF32Q9H0A6 362 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 ADGRL4Q9HBW9 690 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 MKKSQ9NPJ1 570 aaPredicted RBP11.9□□□□□ -0.51
SHMT2-205ENST00000553474 FLRT3Q9NZU0 649 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 RPS6KB2Q9UBS0 482 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 POU2F3Q9UKI9 436 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 NPFFR2Q9Y5X5 522 aa11.9□□□□□ -0.51
SHMT2-205ENST00000553474 NPIPA5A0A0B4J1W7 369 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 ANKRD61A6NGH8 418 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 CD8B2A6NJW9 211 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 CENPXA8MT69 81 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 NPIPA7E9PJI5 369 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 TNFRSF10AO00220 468 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 IDH3BO43837 385 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 OR2T7P0C7T2 308 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 NPIPA8P0DM63 369 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 CD8BP10966 210 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 ST6GAL1P15907 406 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 RFX3P48380 749 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 HSD17B7P56937 341 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 NRG3P56975 720 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 TAB1Q15750 504 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.89□□□□□ -0.51
SHMT2-205ENST00000553474 ZFP69Q49AA0 526 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 SLC35D3Q5M8T2 416 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 TMEM99Q8N816 258 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 OR9A4Q8NGU2 314 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 OR2T27Q8NH04 317 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 HMGB4Q8WW32 186 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 SMPDL3BQ92485 455 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 PHYHIPQ92561 330 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 ST6GAL2Q96JF0 529 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 ZNF285Q96NJ3 590 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 DGAT2Q96PD7 388 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 DCLRE1CQ96SD1 692 aaKnown RBP11.89□□□□□ -0.51
SHMT2-205ENST00000553474 COL25A1Q9BXS0 654 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-205ENST00000553474 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-205ENST00000553474 ENKD1Q9H0I2 346 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 CHRDQ9H2X0 955 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 CYSLTR2Q9NS75 346 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 RABL2AQ9UBK7 228 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-205ENST00000553474 ICAM5Q9UMF0 924 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 RABL2BQ9UNT1 228 aa11.89□□□□□ -0.51
SHMT2-205ENST00000553474 TRAV1-2A0A0B4J238 106 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 A0A1W2PPC4 97 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 SHISA3A0PJX4 238 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 ARPC3O15145 178 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 APEX1P27695 318 aaKnown RBP11.88□□□□□ -0.51
SHMT2-205ENST00000553474 HOXD12P35452 270 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 GPR3P46089 330 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 INPP1P49441 399 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 HSF2Q03933 536 aa11.88□□□□□ -0.51
SHMT2-205ENST00000553474 FUT7Q11130 342 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms