RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 C3orf38Q5JPI3 329 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 POMZP3Q6PJE2 187 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 ATCAYQ86WG3 371 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 LNX2Q8N448 690 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 LRRC17Q8N6Y2 441 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 ELOA3Q8NG57 546 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 OR1N1Q8NGS0 311 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 DNAJA4Q8WW22 397 aaPredicted RBP8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 ATOH1Q92858 354 aaPredicted RBP8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 TMEM203Q969S6 136 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 C3orf49Q96BT1 292 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 DEPDC7Q96QD5 511 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 SECISBP2Q96T21 854 aaKnown RBP8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 TBX5Q99593 518 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 ZNF426Q9BUY5 554 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 HCAR1Q9BXC0 346 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 SLIRPQ9GZT3 109 aaKnown RBP8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 HOXD1Q9GZZ0 328 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 OR51V1Q9H2C8 321 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 TOR4AQ9NXH8 423 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 PCDHGA3Q9Y5H0 932 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 BDP1A6H8Y1 2624 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 PRR23D1E9PI22 279 aaPredicted RBP8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 KHNYNO15037 678 aaKnown RBP8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 HCRTR2O43614 444 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 GDF9O60383 454 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 HEXBP07686 556 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 TSPAN19P0C672 248 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 ANKRD34CP0C6C1 535 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 PRR23D2P0DMB1 279 aaPredicted RBP8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 ITPKBP27987 946 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 CD79BP40259 229 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 GAS1P54826 345 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 TMEM44Q2T9K0 475 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 ZNF791Q3KP31 576 aaPredicted RBP8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 RABEPKQ7Z6M1 372 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 PPP1R3BQ86XI6 285 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 SLITRK4Q8IW52 837 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 GHDCQ8N2G8 530 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 SIRT6Q8N6T7 355 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 C10orf53Q8N6V4 93 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 ZFP41Q8N8Y5 198 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 OR5M3Q8NGP4 307 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 DNAJA3Q96EY1 480 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 GFM1Q96RP9 751 aaKnown RBP8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 TBL1XR1Q9BZK7 514 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 HMG20AQ9NP66 347 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 ENAMQ9NRM1 1142 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 TNFRSF10DQ9UBN6 386 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 OSGIN1Q9UJX0 560 aa8.33□□□□□ -1.08
RAB3IP-218ENST00000553099 A0A087WUJ7 227 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 RIIAD1A6NNX1 92 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 CLDN25C9JDP6 229 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 YKT6O15498 198 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 SCO2O43819 266 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 GPX5O75715 221 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 CER1O95813 267 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 GYPBP06028 91 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 MRPL3P09001 348 aaKnown RBP8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 CLUP10909 449 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 ABCD3P28288 659 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 HTR1FP30939 366 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 SLC6A6P31641 620 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 IDUAP35475 653 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 RPL4P36578 427 aaKnown RBP8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 SLC1A3P43003 542 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 TUBA1BP68363 451 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 MLLT11Q13015 90 aaPredicted RBP8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 SKP2Q13309 424 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 TMED1Q13445 227 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 ZNF404Q494X3 552 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 NIPAL3Q6P499 406 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 RTL4Q6ZR62 310 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 TUBA1AQ71U36 451 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 BTLAQ7Z6A9 289 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 GID4Q8IVV7 300 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 ZNF440Q8IYI8 595 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 FAM181AQ8N9Y4 354 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 SLC35B4Q969S0 331 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 OMA1Q96E52 524 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 SGTBQ96EQ0 304 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 ERMAPQ96PL5 475 aaPredicted RBP8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 RTN4RQ9BZR6 473 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 RACGAP1Q9H0H5 632 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 MCCC2Q9HCC0 563 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 FGF20Q9NP95 211 aaPredicted RBP8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 CMC2Q9NRP2 79 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 OCIAD1Q9NX40 245 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 EXOSC1Q9Y3B2 195 aaKnown RBP8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 LRRTM2O43300 516 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 NDUFB5O43674 189 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 LIMS3P0CW19 117 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 LIMS4P0CW20 117 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 ZNF3P17036 446 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 DCAF7P61962 342 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 DCDP81605 110 aaKnown RBP8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 CRMP1Q14194 572 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 FNDC7Q5VTL7 733 aa8.32□□□□□ -1.08
RAB3IP-218ENST00000553099 WBP2NLQ6ICG8 309 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms