RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 PHC1P78364 1004 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 BST1Q10588 318 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZSWIM7Q19AV6 140 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 NDUFAF6Q330K2 333 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 GPAT3Q53EU6 434 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 SPANXN4Q5MJ08 99 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 TYW3Q6IPR3 259 aaKnown RBP9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 TNFAIP8L2Q6P589 184 aaPredicted RBP9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 NUFIP2Q7Z417 695 aaKnown RBP9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 YTHDF3Q7Z739 585 aaKnown RBP9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 GALNT5Q7Z7M9 940 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 MTDHQ86UE4 582 aaKnown RBP9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 CLEC4FQ8N1N0 589 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 ARFGAP2Q8N6H7 521 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 FAM71CQ8NEG0 241 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 MUCL1Q96DR8 90 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 OR52E6Q96RD3 313 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 PANX1Q96RD7 426 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 KLHDC3Q9BQ90 382 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 PSD2Q9BQI7 771 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 POTEKPQ9BYX7 375 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 MTHFD2LQ9H903 347 aaPredicted RBP9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 PNPOQ9NVS9 261 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 THUMPD1Q9NXG2 353 aaKnown RBP9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 NKIRAS1Q9NYS0 192 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 CHRNA9Q9UGM1 479 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 KCNE5Q9UJ90 142 aa9.67□□□□□ -0.86
VTI1BP3-201ENST00000550220 PCNX3Q9H6A9 2034 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF469Q96JG9 3925 aaPredicted RBP9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 A0A1W2PNR3 127 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 CCDC154A6NI56 674 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 EIF1BO60739 113 aaKnown RBP9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 ERLIN1O75477 346 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 PMS2P2O95744 297 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 TFPIP10646 304 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 IDO1P14902 403 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 RNF144AP50876 292 aaPredicted RBP9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 MPP2Q14168 576 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 ETFDHQ16134 617 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 GSTA3Q16772 222 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 C1QTNF12Q5T7M4 302 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 CLEC9AQ6UXN8 241 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 DNAJC14Q6Y2X3 702 aaPredicted RBP9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 FRRS1Q6ZNA5 592 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 LRRC74BQ6ZQY2 392 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF621Q6ZSS3 439 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 BHLHA15Q7RTS1 189 aaPredicted RBP9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 RNF130Q86XS8 419 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 KRTAP1-3Q8IUG1 177 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF100Q8IYN0 542 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 RAB8BQ92930 207 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 PERPQ96FX8 193 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 RADILQ96JH8 1075 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 CCDC106Q9BWC9 280 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 GSX1Q9H4S2 264 aaPredicted RBP9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF701Q9NV72 531 aaPredicted RBP9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 AIG1Q9NVV5 245 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 CALML5Q9NZT1 146 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 TRAPPC4Q9Y296 219 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 RNF115Q9Y4L5 304 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 NUP214P35658 2090 aaPredicted RBP9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 NAV3Q8IVL0 2385 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 ROS1P08922 2347 aa9.66□□□□□ -0.86
VTI1BP3-201ENST00000550220 IGKV3D-15A0A087WSY6 115 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 TMEM120BA0PK00 339 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 TMEM247A6NEH6 219 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 AGAP5A6NIR3 686 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF814B7Z6K7 855 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 HMGN4O00479 90 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 FAAHO00519 579 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 SMAD9O15198 467 aaKnown RBP9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF208O43345 1280 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 SNNO75324 88 aaPredicted RBP9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 H6PDO95479 791 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 HEXAP06865 529 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 DBIP07108 87 aaKnown RBP9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 IL7RP16871 459 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 HOXB4P17483 251 aaPredicted RBP9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 PTH2RP49190 550 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 CASP9P55211 416 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 UFM1P61960 85 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 CHRNEQ04844 493 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 LTBQ06643 244 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 CAPRIN1Q14444 709 aaKnown RBP9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 TAB1Q15750 504 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 MAPK14Q16539 360 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 TIMM23BQ5SRD1 257 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 NCMAPQ5T1S8 102 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 MSANTD1Q6ZTZ1 278 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 PEX5LQ8IYB4 626 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 ZNF440Q8IYI8 595 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 ANKRD42Q8N9B4 389 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 PIGXQ8TBF5 258 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 PIWIL2Q8TC59 973 aaKnown RBP9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 AKAP1Q92667 903 aaKnown RBP eCLIP9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 GTPBP3Q969Y2 492 aaKnown RBP9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 DDIT4LQ96D03 193 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 TRMT61AQ96FX7 289 aaKnown RBP9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 COX4I2Q96KJ9 171 aa9.65□□□□□ -0.86
VTI1BP3-201ENST00000550220 NAA11Q9BSU3 229 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms