RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 MED18Q9BUE0 208 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 C14orf166Q9Y224 244 aaKnown RBP8.03□□□□□ -1.12
CLIP1-218ENST00000545889 UNC119BA6NIH7 251 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 G3V2L1 256 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 ERVH48-1M5A8F1 160 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF749O43361 778 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 SULT1B1O43704 296 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 APOC3P02656 99 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 HLA-DPB1P04440 258 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 DPP4P27487 766 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 HAAOP46952 286 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 NUDT6P53370 316 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 SLX4IPQ5VYV7 408 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 MSANTD1Q6ZTZ1 278 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF595Q8IYB9 648 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 ELP5Q8TE02 316 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 ACOT12Q8WYK0 555 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 SARAFQ96BY9 339 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 DPCDQ9BVM2 203 aaPredicted RBP8.03□□□□□ -1.12
CLIP1-218ENST00000545889 BTBD2Q9BX70 525 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 IL20RAQ9UHF4 553 aa8.03□□□□□ -1.12
CLIP1-218ENST00000545889 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.03□□□□□ -1.12
CLIP1-218ENST00000545889 MEIOCA2RUB1 952 aa8.02□□□□□ -1.12
CLIP1-218ENST00000545889 OR5K3A6NET4 321 aa8.02□□□□□ -1.12
CLIP1-218ENST00000545889 POM121BA6NF01 834 aa8.02□□□□□ -1.12
CLIP1-218ENST00000545889 ANHXE9PGG2 379 aa8.02□□□□□ -1.12
CLIP1-218ENST00000545889 RFPL3O75679 317 aa8.02□□□□□ -1.12
CLIP1-218ENST00000545889 KCNK2O95069 426 aa8.02□□□□□ -1.12
CLIP1-218ENST00000545889 UGT2B7P16662 529 aa8.02□□□□□ -1.12
CLIP1-218ENST00000545889 ARL3P36405 182 aa8.02□□□□□ -1.12
CLIP1-218ENST00000545889 AP2S1P53680 142 aaPredicted RBP8.02□□□□□ -1.12
CLIP1-218ENST00000545889 RABL3Q5HYI8 236 aa8.02□□□□□ -1.12
CLIP1-218ENST00000545889 AAED1Q7RTV5 226 aa8.02□□□□□ -1.12
CLIP1-218ENST00000545889 C15orf40Q8WUR7 153 aa8.02□□□□□ -1.12
CLIP1-218ENST00000545889 SPOCK3Q9BQ16 436 aa8.02□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF160Q9HCG1 818 aa8.02□□□□□ -1.12
CLIP1-218ENST00000545889 PEX16Q9Y5Y5 336 aa8.02□□□□□ -1.12
CLIP1-218ENST00000545889 GPR179Q6PRD1 2367 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 LOC100509620A0A075B734 347 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 SMLR1H3BR10 107 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 GPR171O14626 319 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 AKR7A2O43488 359 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 EFEMP2O95967 443 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 ADPRHP54922 357 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 TAS2R43P59537 309 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 B2MP61769 119 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 SIGLEC14Q08ET2 396 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 DAG1Q14118 895 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 EXT1Q16394 746 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 GRHL2Q6ISB3 625 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 FOXRED2Q8IWF2 684 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 KRTCAP2Q8N6L1 136 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 PACRGLQ8N7B6 248 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF615Q8N8J6 731 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 SYT14Q8NB59 555 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 OR52R1Q8NGF1 315 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 C9orf43Q8TAL5 461 aaPredicted RBP8.02□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF431Q8TF32 576 aaPredicted RBP8.02□□□□□ -1.13
CLIP1-218ENST00000545889 NEIL2Q969S2 332 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 YTHDF1Q9BYJ9 559 aaKnown RBP8.02□□□□□ -1.13
CLIP1-218ENST00000545889 PLAC1Q9HBJ0 212 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 COPZ2Q9P299 210 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 MALT1Q9UDY8 824 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 PPT2Q9UMR5 302 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 DHDHQ9UQ10 334 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 FNDC1Q4ZHG4 1894 aaPredicted RBP8.02□□□□□ -1.13
CLIP1-218ENST00000545889 TMEM202A6NGA9 273 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 GABRR3A8MPY1 467 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 FAM166BA8MTA8 275 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 DIRAS3O95661 229 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 PNMTP11086 282 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 HIST1H1TP22492 207 aaPredicted RBP8.02□□□□□ -1.13
CLIP1-218ENST00000545889 PPP2CBP62714 309 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 PPP2CAP67775 309 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 HLA-BQ31612 363 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 FAM209BQ5JX69 171 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 VRK3Q8IV63 474 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 MFSD8Q8NHS3 518 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 OR1E3Q8WZA6 343 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 RPL3LQ92901 407 aaKnown RBP8.02□□□□□ -1.13
CLIP1-218ENST00000545889 EID2BQ96D98 161 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 TIMD4Q96H15 378 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF845Q96IR2 970 aaPredicted RBP8.02□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF416Q9BWM5 594 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 TM9SF3Q9HD45 589 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 PLEKHM1Q9Y4G2 1056 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 LOC102725191A0A1B0GVB3 256 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 A0A1B0GX78 115 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 A0A1W2PPC4 97 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 TRAPPC13A5PLN9 417 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 APOL3O95236 402 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 S100A6P06703 90 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 PSMB5P28074 263 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 LTBRP36941 435 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 PRLHRP49683 370 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 CRISP1P54107 249 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 PITPNAQ00169 270 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 GPR19Q15760 415 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 VMACQ2NL98 169 aa8.02□□□□□ -1.13
CLIP1-218ENST00000545889 TMEM207Q6UWW9 146 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms