RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 ATF1P18846 271 aa14.59□□□□□ -0.07
LDLR-204ENST00000545707 CXCL3P19876 107 aa14.59□□□□□ -0.07
LDLR-204ENST00000545707 RPS4Y1P22090 263 aaKnown RBP14.59□□□□□ -0.07
LDLR-204ENST00000545707 GIFP27352 417 aa14.59□□□□□ -0.07
LDLR-204ENST00000545707 RBMS1P29558 406 aaKnown RBP14.59□□□□□ -0.07
LDLR-204ENST00000545707 ANKRD54Q6NXT1 300 aa14.59□□□□□ -0.07
LDLR-204ENST00000545707 OR4N2Q8NGD1 307 aa14.59□□□□□ -0.07
LDLR-204ENST00000545707 OR4K13Q8NH42 304 aa14.59□□□□□ -0.07
LDLR-204ENST00000545707 TEKT2Q9UIF3 430 aa14.59□□□□□ -0.07
LDLR-204ENST00000545707 HEBP2Q9Y5Z4 205 aa14.59□□□□□ -0.07
LDLR-204ENST00000545707 TNFRSF10AO00220 468 aa14.58□□□□□ -0.07
LDLR-204ENST00000545707 CA3P07451 260 aa14.58□□□□□ -0.07
LDLR-204ENST00000545707 RAB3BP20337 219 aa14.58□□□□□ -0.07
LDLR-204ENST00000545707 SLC2A5P22732 501 aa14.58□□□□□ -0.07
LDLR-204ENST00000545707 EMDP50402 254 aa14.58□□□□□ -0.07
LDLR-204ENST00000545707 SRP54P61011 504 aaKnown RBP14.58□□□□□ -0.07
LDLR-204ENST00000545707 GPM6BQ13491 265 aa14.58□□□□□ -0.07
LDLR-204ENST00000545707 GXYLT1Q4G148 440 aa14.58□□□□□ -0.07
LDLR-204ENST00000545707 PXKQ7Z7A4 578 aa14.58□□□□□ -0.07
LDLR-204ENST00000545707 SIAH3Q8IW03 269 aa14.58□□□□□ -0.07
LDLR-204ENST00000545707 C9orf62Q8N4C0 152 aa14.58□□□□□ -0.07
LDLR-204ENST00000545707 OR52E2Q8NGJ4 325 aa14.58□□□□□ -0.07
LDLR-204ENST00000545707 GSDMCQ9BYG8 508 aa14.58□□□□□ -0.07
LDLR-204ENST00000545707 RBCK1Q9BYM8 510 aa14.58□□□□□ -0.07
LDLR-204ENST00000545707 AK6Q9Y3D8 172 aaKnown RBP14.58□□□□□ -0.07
LDLR-204ENST00000545707 C2orf16Q68DN1 1984 aa14.58□□□□□ -0.08
LDLR-204ENST00000545707 A0A1B0GWA3 101 aa14.58□□□□□ -0.08
LDLR-204ENST00000545707 H0YGG7 62 aa14.58□□□□□ -0.08
LDLR-204ENST00000545707 K7EQS6 105 aa14.58□□□□□ -0.08
LDLR-204ENST00000545707 SC5DO75845 299 aa14.58□□□□□ -0.08
LDLR-204ENST00000545707 RASGRP1O95267 797 aa14.58□□□□□ -0.08
LDLR-204ENST00000545707 TFP02787 698 aa14.58□□□□□ -0.08
LDLR-204ENST00000545707 ANKRD34CP0C6C1 535 aa14.58□□□□□ -0.08
LDLR-204ENST00000545707 MAGEB1P43366 347 aa14.58□□□□□ -0.08
LDLR-204ENST00000545707 LSSP48449 732 aa14.58□□□□□ -0.08
LDLR-204ENST00000545707 ARF3P61204 181 aaPredicted RBP14.58□□□□□ -0.08
LDLR-204ENST00000545707 TFF2Q03403 129 aa14.58□□□□□ -0.08
LDLR-204ENST00000545707 ENPP2Q13822 863 aa14.58□□□□□ -0.08
LDLR-204ENST00000545707 DMKNQ6E0U4 476 aaPredicted RBP14.58□□□□□ -0.08
LDLR-204ENST00000545707 ZNRF4Q8WWF5 429 aa14.58□□□□□ -0.08
LDLR-204ENST00000545707 FAM3CQ92520 227 aa14.58□□□□□ -0.08
LDLR-204ENST00000545707 ERMAPQ96PL5 475 aaPredicted RBP14.58□□□□□ -0.08
LDLR-204ENST00000545707 MRPL15Q9P015 296 aaKnown RBP14.58□□□□□ -0.08
LDLR-204ENST00000545707 CTSBP07858 339 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 ZNF3P17036 446 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 HK1P19367 917 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 CRYZQ08257 329 aaKnown RBP14.57□□□□□ -0.08
LDLR-204ENST00000545707 TMEM196Q5HYL7 178 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 BICRALQ6AI39 1079 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 LRRC17Q8N6Y2 441 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 ZNF655Q8N720 491 aaPredicted RBP14.57□□□□□ -0.08
LDLR-204ENST00000545707 CDRT4Q8N9R6 151 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 OR11H4Q8NGC9 324 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 OR8H1Q8NGG4 311 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 FGF14Q92915 247 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 GCDHQ92947 438 aaPredicted RBP14.57□□□□□ -0.08
LDLR-204ENST00000545707 YIPF5Q969M3 257 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 GHITMQ9H3K2 345 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 TMEM27Q9HBJ8 222 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 MCCC2Q9HCC0 563 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 BRD7Q9NPI1 651 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 EVA1BQ9NVM1 165 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 SLCO1C1Q9NYB5 712 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 PILRAQ9UKJ1 303 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 C5orf67F2Z3F1 127 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 PSMD9O00233 223 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 HCRTR1O43613 425 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 KCNJ13O60928 360 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 TCRBP04435 133 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 POU3F3P20264 500 aaPredicted RBP14.57□□□□□ -0.08
LDLR-204ENST00000545707 COL9A1P20849 921 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 PSMB10P40306 273 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 KIR2DL1P43626 348 aaPredicted RBP14.57□□□□□ -0.08
LDLR-204ENST00000545707 BTG1P62324 171 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 POU6F2P78424 691 aaPredicted RBP14.57□□□□□ -0.08
LDLR-204ENST00000545707 MGAT2Q10469 447 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 FHL1Q13642 323 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 GPR18Q14330 331 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 CLPPQ16740 277 aaPredicted RBP14.57□□□□□ -0.08
LDLR-204ENST00000545707 PRICKLE4Q2TBC4 344 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 PARM1Q6UWI2 310 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 GPALPP1Q8IXQ4 340 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 SAMD14Q8IZD0 417 aaPredicted RBP14.57□□□□□ -0.08
LDLR-204ENST00000545707 TOMM5Q8N4H5 51 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 FAM98AQ8NCA5 519 aaKnown RBP14.57□□□□□ -0.08
LDLR-204ENST00000545707 C17orf50Q8WW18 174 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 THAP4Q8WY91 577 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 DACT3Q96B18 629 aaPredicted RBP14.57□□□□□ -0.08
LDLR-204ENST00000545707 KCTD12Q96CX2 325 aaKnown RBP14.57□□□□□ -0.08
LDLR-204ENST00000545707 PDCD1LG2Q9BQ51 273 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 ZNF559Q9BR84 538 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 FOLH1BQ9HBA9 442 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 DUSP22Q9NRW4 184 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 GDE1Q9NZC3 331 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 ST6GALNAC2Q9UJ37 374 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 MGAT4AQ9UM21 535 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 ADAM18Q9Y3Q7 739 aa14.57□□□□□ -0.08
LDLR-204ENST00000545707 TEX13CA0A0J9YWL9 993 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 MEN1O00255 615 aa14.56□□□□□ -0.08
LDLR-204ENST00000545707 DHFRP00374 187 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms