RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 ANKFN1Q8N957 763 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 STEAP2Q8NFT2 490 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 PERPQ96FX8 193 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 C18orf12Q96KH6 178 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 ZNF300Q96RE9 604 aaPredicted RBP18.75■□□□□ 0.59
SCARB1-210ENST00000545493 TACO1Q9BSH4 297 aaKnown RBP18.75■□□□□ 0.59
SCARB1-210ENST00000545493 CCDC106Q9BWC9 280 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 EXOSC3Q9NQT5 275 aaKnown RBP18.75■□□□□ 0.59
SCARB1-210ENST00000545493 THAP1Q9NVV9 213 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 ROS1P08922 2347 aa18.75■□□□□ 0.59
SCARB1-210ENST00000545493 ZNF814B7Z6K7 855 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 KITP10721 976 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 DIO1P49895 249 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 SYPL1Q16563 259 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 GPAT3Q53EU6 434 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 SFRP5Q5T4F7 317 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.74■□□□□ 0.59
SCARB1-210ENST00000545493 MAVSQ7Z434 540 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 SPATA19Q7Z5L4 167 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 P3H2Q8IVL5 708 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 SLC25A43Q8WUT9 341 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-210ENST00000545493 TMEM234Q8WY98 164 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 MAELQ96JY0 434 aaKnown RBP18.74■□□□□ 0.59
SCARB1-210ENST00000545493 PANX1Q96RD7 426 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 SLC38A1Q9H2H9 487 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 CTPS2Q9NRF8 586 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 PRSS50Q9UI38 385 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 NAV3Q8IVL0 2385 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 ARID1AO14497 2285 aa18.74■□□□□ 0.59
SCARB1-210ENST00000545493 CCDC154A6NI56 674 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 ADAP00813 363 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 GSNP06396 782 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 RPS4Y1P22090 263 aaKnown RBP18.73■□□□□ 0.59
SCARB1-210ENST00000545493 RYKP34925 604 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 OR3A2P47893 321 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 RASGEF1BQ0VAM2 473 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 TAB1Q15750 504 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 KRTAP21-3Q3LHN1 58 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 COX20Q5RI15 118 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 DNAJC14Q6Y2X3 702 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-210ENST00000545493 TMPPEQ6ZT21 453 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 BIVMQ86UB2 503 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 RAB3IL1Q8TBN0 382 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 PNPT1Q8TCS8 783 aaKnown RBP18.73■□□□□ 0.59
SCARB1-210ENST00000545493 ZNF75CPQ92670 426 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-210ENST00000545493 ARL8AQ96BM9 186 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 TLCD1Q96CP7 247 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 CHRNA9Q9UGM1 479 aa18.73■□□□□ 0.59
SCARB1-210ENST00000545493 TRPC5OSA6NMA1 111 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 AP3D1O14617 1153 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 ARHGEF9O43307 516 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 INHBBP09529 407 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 IL32P24001 234 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 MAGOHP61326 146 aaKnown RBP18.72■□□□□ 0.59
SCARB1-210ENST00000545493 KCNJ10P78508 379 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 SLC9B1Q4ZJI4 515 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 Q6ZT83 130 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 GRINAQ7Z429 371 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 YTHDF3Q7Z739 585 aaKnown RBP18.72■□□□□ 0.59
SCARB1-210ENST00000545493 ATG4DQ86TL0 474 aaPredicted RBP18.72■□□□□ 0.59
SCARB1-210ENST00000545493 TRIML2Q8N7C3 387 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 ZNF563Q8TA94 476 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 CNOT9Q92600 299 aaKnown RBP18.72■□□□□ 0.59
SCARB1-210ENST00000545493 KISS1RQ969F8 398 aaPredicted RBP18.72■□□□□ 0.59
SCARB1-210ENST00000545493 ZNF775Q96BV0 537 aaPredicted RBP18.72■□□□□ 0.59
SCARB1-210ENST00000545493 DNAJA3Q96EY1 480 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 ARL5BQ96KC2 179 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 COX4I2Q96KJ9 171 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 Q96MF0 132 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 TRNT1Q96Q11 434 aaKnown RBP18.72■□□□□ 0.59
SCARB1-210ENST00000545493 OR52E6Q96RD3 313 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 POTEKPQ9BYX7 375 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 GSX2Q9BZM3 304 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 SERINC1Q9NRX5 453 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 SLC6A13Q9NSD5 602 aa18.72■□□□□ 0.59
SCARB1-210ENST00000545493 ZNF724A8MTY0 619 aa18.71■□□□□ 0.59
SCARB1-210ENST00000545493 HS3ST1O14792 307 aa18.71■□□□□ 0.59
SCARB1-210ENST00000545493 APOBEC1P41238 236 aaKnown RBP18.71■□□□□ 0.59
SCARB1-210ENST00000545493 PTH2RP49190 550 aa18.71■□□□□ 0.59
SCARB1-210ENST00000545493 SLC18A1P54219 525 aa18.71■□□□□ 0.59
SCARB1-210ENST00000545493 CSNK2A1P68400 391 aaPredicted RBP18.71■□□□□ 0.59
SCARB1-210ENST00000545493 MAPK11Q15759 364 aa18.71■□□□□ 0.59
SCARB1-210ENST00000545493 PDCD4Q53EL6 469 aaKnown RBP18.71■□□□□ 0.59
SCARB1-210ENST00000545493 ALKBH2Q6NS38 261 aa18.71■□□□□ 0.59
SCARB1-210ENST00000545493 LRRC74BQ6ZQY2 392 aa18.71■□□□□ 0.59
SCARB1-210ENST00000545493 CIARTQ8N365 385 aaPredicted RBP18.71■□□□□ 0.59
SCARB1-210ENST00000545493 ARFGAP2Q8N6H7 521 aa18.71■□□□□ 0.59
SCARB1-210ENST00000545493 GLB1L3Q8NCI6 653 aaPredicted RBP18.71■□□□□ 0.59
SCARB1-210ENST00000545493 HDHD5Q9BXW7 423 aa18.71■□□□□ 0.59
SCARB1-210ENST00000545493 OR11A1Q9GZK7 315 aa18.71■□□□□ 0.59
SCARB1-210ENST00000545493 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.71■□□□□ 0.59
SCARB1-210ENST00000545493 SPIN1Q9Y657 262 aaPredicted RBP18.71■□□□□ 0.59
SCARB1-210ENST00000545493 ZANQ9Y493 2812 aa18.71■□□□□ 0.59
SCARB1-210ENST00000545493 IGKV3D-15A0A087WSY6 115 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 AGAP5A6NIR3 686 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 ZNF716A6NP11 495 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 SULT2B1O00204 365 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 LYZL6O75951 148 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 COX5AP20674 150 aa18.7■□□□□ 0.58
SCARB1-210ENST00000545493 ADSLP30566 484 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms