RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 MAPK14Q16539 360 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 UBE2NLQ5JXB2 153 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 TMEM69Q5SWH9 247 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 LRRC28Q86X40 367 aaPredicted RBP5.39□□□□□ -1.55
VPS50-220ENST00000544910 C10orf111Q8N326 155 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 Q8N9G6 341 aaPredicted RBP5.39□□□□□ -1.55
VPS50-220ENST00000544910 OR52N1Q8NH53 320 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 AP1S3Q96PC3 154 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 STACQ99469 402 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 GAS2L1Q99501 681 aaPredicted RBP5.39□□□□□ -1.55
VPS50-220ENST00000544910 THAP7Q9BT49 309 aaPredicted RBP5.39□□□□□ -1.55
VPS50-220ENST00000544910 PBDC1Q9BVG4 233 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 LYRM4Q9HD34 91 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 KCNN3Q9UGI6 736 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 NUFIP1Q9UHK0 495 aaKnown RBP5.39□□□□□ -1.55
VPS50-220ENST00000544910 CBLCQ9ULV8 474 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 ZNF337Q9Y3M9 751 aa5.39□□□□□ -1.55
VPS50-220ENST00000544910 TRPM7Q96QT4 1865 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 FAM183AA6NL82 134 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 F5H0A9 414 aaPredicted RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 PVRP15151 417 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 PCBP4P57723 403 aaKnown RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 YPEL5P62699 121 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 PLCXD2Q0VAA5 305 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 COL9A2Q14055 689 aaPredicted RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 ODF4Q2M2E3 257 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 ESCO2Q56NI9 601 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 TCTE1Q5JU00 501 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 NRARPQ7Z6K4 114 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 TPRA1Q86W33 373 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 ZMYND19Q96E35 227 aaPredicted RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 SLC35A4Q96G79 324 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 CHST8Q9H2A9 424 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 MED20Q9H944 212 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 ISYNA1Q9NPH2 558 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 SLC35A3Q9Y2D2 325 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 IER3IP1Q9Y5U9 82 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 A8MU76 341 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 SOCS6O14544 535 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 YY2O15391 372 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 UCHL1P09936 223 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 CLEC2LP0C7M8 214 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 PRKCAP17252 672 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 ENDOUP21128 410 aaKnown RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 ADH6P28332 368 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 CD79BP40259 229 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 VAMP2P63027 116 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 SNTB2Q13425 540 aaKnown RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 FGFBP1Q14512 234 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 SSX2Q16385 188 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 KIAA0895LQ68EN5 471 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 SLC25A25Q6KCM7 469 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 TCTN3Q6NUS6 607 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 FTMTQ8N4E7 242 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 OR5AK2Q8NH90 309 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 PFN4Q8NHR9 129 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 ARL11Q969Q4 196 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 C7orf50Q9BRJ6 194 aaKnown RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 PRR14Q9BWN1 585 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 TMEM185BQ9H7F4 350 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 GMEB2Q9UKD1 530 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 ERVK-19Q9WJR5 959 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 A0A0A6YYC8 382 aaPredicted RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 I3L1I5 382 aaPredicted RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 HCRTR2O43614 444 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 SSX5O60225 188 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 ICMTO60725 284 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 PAPLNO95428 1278 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 ZNF20P17024 532 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 PGCP20142 388 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 EVI2BP34910 448 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 RAB5CP51148 216 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 MRPS21P82921 87 aaKnown RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 FAPQ12884 760 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 ACSM3Q53FZ2 586 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 SOWAHCQ53LP3 525 aaPredicted RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 HBMQ6B0K9 141 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 C1orf94Q6P1W5 598 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 MCATQ8IVS2 390 aaKnown RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 TMEFF1Q8IYR6 380 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 CYB561A3Q8NBI2 242 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 BEST4Q8NFU0 473 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 OR5H6Q8NGV6 325 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 NT5CQ8TCD5 201 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 CNTNAP3BQ96NU0 1288 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 PHB2Q99623 299 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 ARHGDIGQ99819 225 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 SLIRPQ9GZT3 109 aaKnown RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 SERTAD3Q9UJW9 196 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 A4GNTQ9UNA3 340 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 MN1Q10571 1320 aaPredicted RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 NAP1L6A6NFF2 107 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 ZNF705EA8MWA4 302 aaPredicted RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 C11orf98E9PRG8 122 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 H3BSH0 61 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 EIF1AYO14602 144 aaKnown RBP5.38□□□□□ -1.55
VPS50-220ENST00000544910 SNAPINO95295 136 aa5.38□□□□□ -1.55
VPS50-220ENST00000544910 AHSA1O95433 338 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms