RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 MFSD13AQ14CX5 517 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 PDK3Q15120 406 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 TMEM44Q2T9K0 475 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 MMEL1Q495T6 779 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 SLC9B1Q4ZJI4 515 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 AGKQ53H12 422 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 SYT14P1Q58G82 188 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 SLC25A53Q5H9E4 307 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 DCST1Q5T197 706 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 INTS11Q5TA45 600 aaKnown RBP5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 DESI1Q6ICB0 168 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 WBP2NLQ6ICG8 309 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 REEP3Q6NUK4 255 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 APOOLQ6UXV4 268 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 TMPPEQ6ZT21 453 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 SEM1Q6ZVN7 128 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 GALNT5Q7Z7M9 940 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 MTDHQ86UE4 582 aaKnown RBP5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 P2RY8Q86VZ1 359 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 SNX32Q86XE0 403 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 ZZZ3Q8IYH5 903 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 ZNF100Q8IYN0 542 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 DEPDC4Q8N2C3 294 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 PCYOX1LQ8NBM8 494 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 ATP6V1C2Q8NEY4 427 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 BBS10Q8TAM1 723 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 HSD17B8Q92506 261 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 PIGTQ969N2 578 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 STARD4Q96DR4 205 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 SPDL1Q96EA4 605 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 OTUB1Q96FW1 271 aaPredicted RBP5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 OR5B2Q96R09 309 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 TMUB1Q9BVT8 246 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 KLHL4Q9C0H6 718 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 PIF1Q9H611 641 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 NPDC1Q9NQX5 325 aaPredicted RBP5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 RASSF1Q9NS23 344 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 GID8Q9NWU2 228 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 GALNT8Q9NY28 637 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 CRIM1Q9NZV1 1036 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 CCDC167Q9P0B6 97 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 ANGPT4Q9Y264 503 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 TRAPPC4Q9Y296 219 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 GPR52Q9Y2T5 361 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 NDUFAF1Q9Y375 327 aa5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 PRRC2AP48634 2157 aaKnown RBP5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 NSD1Q96L73 2696 aaPredicted RBP5.03□□□□□ -1.6
CLSTN3-215ENST00000544584 A0A0G2JND7 137 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 A0A1W2PP18 115 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 BBIP1A8MTZ0 92 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 C19orf84I3L1E1 186 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 NR5A2O00482 541 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 SLC22A2O15244 555 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 AKAP8O43823 692 aaKnown RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 OR2T1O43869 369 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 FCMRO60667 390 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 MRPL33O75394 65 aaKnown RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 CTAG2O75638 210 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 KRT33AO76009 404 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 TGM6O95932 706 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 BCHEP06276 602 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 PNMTP11086 282 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 H2AFXP16104 143 aaPredicted RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 ADSLP30566 484 aaPredicted RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 UGT2B10P36537 528 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 PGM1P36871 562 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 KIR2DL2P43627 348 aaPredicted RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 IDH2P48735 452 aaKnown RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 IDH3AP50213 366 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 AGFG1P52594 562 aaKnown RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 SUCLG1P53597 346 aaKnown RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 CLDN20P56880 219 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 SESN3P58005 492 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 RBBP4Q09028 425 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 RGNQ15493 299 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 CD226Q15762 336 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 ZNF239Q16600 458 aaKnown RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 EXOC3L2Q2M3D2 409 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 BEX5Q5H9J7 111 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 ZNF311Q5JNZ3 666 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 GCNT6Q5T4J0 391 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 RNF220Q5VTB9 566 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 OR7E24Q6IFN5 339 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 TYW3Q6IPR3 259 aaKnown RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 BLOC1S3Q6QNY0 202 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 KLHL17Q6TDP4 642 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 FRRS1Q6ZNA5 592 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 PLEKHM3Q6ZWE6 761 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 NET1Q7Z628 596 aaPredicted RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 RANBP3LQ86VV4 465 aaPredicted RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 LIX1LQ8IVB5 337 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 UBE2J2Q8N2K1 259 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 RELL2Q8NC24 303 aaPredicted RBP5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 C11orf65Q8NCR3 313 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 NAXEQ8NCW5 288 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 OR5M1Q8NGP8 315 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 OR52P1PQ8NH57 321 aa5.02□□□□□ -1.61
CLSTN3-215ENST00000544584 SLC26A7Q8TE54 656 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms