RNA–Protein interactions for RNA: ENST00000544497.1

DDX47-211, Transcript of DEAD-box helicase 47, humanhuman

TSL 2

Gene DDX47, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-211ENST00000544497 LRRC40Q9H9A6 602 aa5.18□□□□□ -1.58
DDX47-211ENST00000544497 MRM3Q9HC36 420 aaKnown RBP5.18□□□□□ -1.58
DDX47-211ENST00000544497 ZDHHC4Q9NPG8 344 aa5.18□□□□□ -1.58
DDX47-211ENST00000544497 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.18□□□□□ -1.58
DDX47-211ENST00000544497 NINJ2Q9NZG7 142 aa5.18□□□□□ -1.58
DDX47-211ENST00000544497 TUBGCP4Q9UGJ1 667 aa5.18□□□□□ -1.58
DDX47-211ENST00000544497 TRMT6Q9UJA5 497 aaKnown RBP5.18□□□□□ -1.58
DDX47-211ENST00000544497 ICAM5Q9UMF0 924 aa5.18□□□□□ -1.58
DDX47-211ENST00000544497 SATB2Q9UPW6 733 aa5.18□□□□□ -1.58
DDX47-211ENST00000544497 FOXA2Q9Y261 457 aaPredicted RBP5.18□□□□□ -1.58
DDX47-211ENST00000544497 GMEB1Q9Y692 573 aa5.18□□□□□ -1.58
DDX47-211ENST00000544497 COL6A6A6NMZ7 2263 aa5.18□□□□□ -1.58
DDX47-211ENST00000544497 PTPRQQ9UMZ3 2332 aa5.18□□□□□ -1.58
DDX47-211ENST00000544497 MGAQ8IWI9 3026 aa5.18□□□□□ -1.58
DDX47-211ENST00000544497 MYOFQ9NZM1 2061 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 TRAV19A0A0A6YYK7 116 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 RNF103-CHMP3A0A140T963 221 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 SLC9B1P1A6NJY1 282 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 ZNF732B4DXR9 585 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 PRR23D1E9PI22 279 aaPredicted RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 BLOC1S5-TXNDC5H3BN57 136 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 RNF103O00237 685 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 TRAFD1O14545 582 aaPredicted RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 PCDH7O60245 1069 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 NADKO95544 446 aaPredicted RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 KLF8O95600 359 aaPredicted RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 EML2O95834 649 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 EPOP01588 193 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 APODP05090 189 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 CHRNGP07510 517 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 CD48P09326 243 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 PRR23D2P0DMB1 279 aaPredicted RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 HLA-EP13747 358 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 CCDC130P13994 396 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 ATF6P18850 670 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 CCR1P32246 355 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 SPRP35270 261 aaPredicted RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 SERPINB5P36952 375 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 MARCKSL1P49006 195 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 SULT1E1P49888 294 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 TKTL1P51854 596 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 CLDN6P56747 220 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 ELF3P78545 371 aaPredicted RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 BASP1P80723 227 aaKnown RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 SEMG2Q02383 582 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 GOLGA7BQ2TAP0 167 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 LRRC37A5PQ49AS3 106 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 SPANXN3Q5MJ09 141 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 PMF1Q6P1K2 205 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 B3GLCTQ6Y288 498 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 TRMT11Q7Z4G4 463 aaKnown RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 ACOT1Q86TX2 421 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 LACC1Q8IV20 430 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 RAB42Q8N4Z0 105 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 RDH11Q8TC12 318 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 SETD7Q8WTS6 366 aaKnown RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 RNF139Q8WU17 664 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 SLC13A3Q8WWT9 602 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 HAS2Q92819 552 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 POP5Q969H6 163 aaKnown RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 DTD2Q96FN9 168 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 SENP8Q96LD8 212 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 AGAP3Q96P47 875 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 NPY6RQ99463 290 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 MED10Q9BTT4 135 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 FAM192AQ9GZU8 254 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 NEUROG2Q9H2A3 272 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 VCX3BQ9H321 246 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 SYTL2Q9HCH5 934 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 GPN1Q9HCN4 374 aaPredicted RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 VCX3AQ9NNX9 186 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 DMAP1Q9NPF5 467 aaPredicted RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 ACP6Q9NPH0 428 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 MRPL40Q9NQ50 206 aaKnown RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 ETNK2Q9NVF9 386 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 TMCO1Q9UM00 188 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 RPH3AQ9Y2J0 694 aaPredicted RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 SELENOKQ9Y6D0 94 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 GOLGA4Q13439 2230 aaKnown RBP5.17□□□□□ -1.58
DDX47-211ENST00000544497 RELNP78509 3460 aa5.17□□□□□ -1.58
DDX47-211ENST00000544497 IGHV4-4A0A075B6R2 117 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 ARPC4-TTLL3A0A0A6YYG9 625 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 TRBV2A0A0J9YWF9 115 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.16□□□□□ -1.58
DDX47-211ENST00000544497 FAM72CH0Y354 149 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 TLR4O00206 839 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 COPEO14579 308 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 ZNF195O14628 629 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 SLC9A3R1O14745 358 aaPredicted RBP5.16□□□□□ -1.58
DDX47-211ENST00000544497 RRP8O43159 456 aaKnown RBP5.16□□□□□ -1.58
DDX47-211ENST00000544497 MLNRO43193 412 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 SAP30O75446 220 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 KLHL2O95198 593 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 APOEP02649 317 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 ALPPP05187 535 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 APRTP07741 180 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 PRSS56P0CW18 603 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 ALPPL2P10696 532 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 AREGP15514 252 aa5.16□□□□□ -1.58
DDX47-211ENST00000544497 PGAM1P18669 254 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms