RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 THUMPD3Q9BV44 507 aaKnown RBP17.53■□□□□ 0.4
LPCAT3-211ENST00000543794 LAT2Q9GZY6 243 aa17.53■□□□□ 0.4
LPCAT3-211ENST00000543794 ASB6Q9NWX5 421 aa17.53■□□□□ 0.4
LPCAT3-211ENST00000543794 TAS2R16Q9NYV7 291 aa17.53■□□□□ 0.4
LPCAT3-211ENST00000543794 NOSIPQ9Y314 301 aaKnown RBP17.53■□□□□ 0.4
LPCAT3-211ENST00000543794 A0A1W2PR80 420 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 SERINC4A6NH21 518 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 ZNF716A6NP11 495 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 M0R1B8 84 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 SCAMP2O15127 329 aaKnown RBP17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 URI1O94763 535 aaPredicted RBP17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 LAMP1P11279 417 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 CPA3P15088 417 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 SRSF2Q01130 221 aaKnown RBP17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 CHRNB3Q05901 458 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 SKP2Q13309 424 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 TP53BP2Q13625 1128 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 GABRA6Q16445 453 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 SYT14P1Q58G82 188 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 PDZK1Q5T2W1 519 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 OR7E24Q6IFN5 339 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 NMUR2Q9GZQ4 415 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 KCNS2Q9ULS6 477 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 FIS1Q9Y3D6 152 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 DNAJC15Q9Y5T4 150 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 PMF1-BGLAPU3KQ54 211 aa17.52■□□□□ 0.4
LPCAT3-211ENST00000543794 VWC2LB2RUY7 222 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 APOBEC3AP31941 199 aaPredicted RBP17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 CRHR1P34998 444 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 HPCAL1P37235 193 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 RPL3P39023 403 aaKnown RBP17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 CCT5P48643 541 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 MERTKQ12866 999 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 ZNF141Q15928 474 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 GALNTL6Q49A17 601 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 FAM120AOSQ5T036 256 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 MALRD1Q5VYJ5 2156 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 LIPMQ5VYY2 423 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 KANK2Q63ZY3 851 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 FAM166AQ6J272 317 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 NATD1Q8N6N6 113 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 WDR31Q8NA23 367 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 SLC25A43Q8WUT9 341 aaPredicted RBP17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 TMEM234Q8WY98 164 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 OR7D2Q96RA2 312 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 C1QTNF6Q9BXI9 259 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 ACER3Q9NUN7 267 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 MALT1Q9UDY8 824 aa17.51■□□□□ 0.39
LPCAT3-211ENST00000543794 SLC35F4A4IF30 521 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 TMEM114B3SHH9 223 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 LY6HO94772 140 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 C6orf47O95873 294 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 CHEK2O96017 543 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 FGF4P08620 206 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 SLC16A1P53985 500 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 FOXG1P55316 489 aaPredicted RBP17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 LSM12Q3MHD2 195 aaKnown RBP17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 SPDYE7PQ495Y7 208 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 HOMEZQ8IX15 550 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 SFXN5Q8TD22 340 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 COQ8BQ96D53 544 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 TRMOQ9BU70 441 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 C12orf65Q9H3J6 166 aaKnown RBP17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 FKRPQ9H9S5 495 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 KCNE5Q9UJ90 142 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 ATP23Q9Y6H3 246 aa17.5■□□□□ 0.39
LPCAT3-211ENST00000543794 LOC100289279A0A1B0GTE1 492 aa17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 PDLIM1O00151 329 aa17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 GPR171O14626 319 aa17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 MRPL33O75394 65 aaKnown RBP17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 CYP7B1O75881 506 aa17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 ITGA5P08648 1049 aa17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 PGCP20142 388 aa17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 APOBEC1P41238 236 aaKnown RBP17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 SWI5Q1ZZU3 235 aa17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 UGT3A2Q3SY77 523 aa17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 CCDC63Q8NA47 563 aa17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 OR5D16Q8NGK9 328 aa17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 MOAP1Q96BY2 351 aa17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 MSI2Q96DH6 328 aaKnown RBP17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 GATA5Q9BWX5 397 aaPredicted RBP17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 CHODLQ9H9P2 273 aa17.49■□□□□ 0.39
LPCAT3-211ENST00000543794 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.49■□□□□ 0.399e-7■■■□□ 17
LPCAT3-211ENST00000543794 NDUFS8O00217 210 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 FCMRO60667 390 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 PMS2P2O95744 297 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 CSTAP01040 98 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 NR4A2P43354 598 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 PDLIM4P50479 330 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 GGTLC2Q14390 218 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 GPR68Q15743 365 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 MST1LQ2TV78 715 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 IL17RELQ6ZVW7 336 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 C10orf107Q8IVU9 208 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 MNS1Q8NEH6 495 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 PIGXQ8TBF5 258 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 ZHX1-C8orf76Q96EF9 292 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 ARL5BQ96KC2 179 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 CCDC106Q9BWC9 280 aa17.48■□□□□ 0.39
LPCAT3-211ENST00000543794 PRR14Q9BWN1 585 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms