RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 TAAR8Q969N4 342 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 CD320Q9NPF0 282 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 FBXO5Q9UKT4 447 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 ZNRF3Q9ULT6 936 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 OAS3Q9Y6K5 1087 aaKnown RBP8.28□□□□□ -1.08
VPS13D-212ENST00000543766 CCDC195A0A1B0GUA6 201 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 A0A1W2PRX2 142 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 TCP10L2B9ZVM9 353 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 HAS3O00219 553 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 ZNF749O43361 778 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 B3GAT3O94766 335 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 FTH1P02794 183 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 HTR1AP08908 422 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 NBEAP1P0C6P0 100 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 HOXD8P13378 290 aaPredicted RBP8.28□□□□□ -1.08
VPS13D-212ENST00000543766 SAT1P21673 171 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 CD72P21854 359 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 HRH2P25021 359 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 HTR1BP28222 390 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 TFPI2P48307 235 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 ERVFRD-1P60508 538 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 HNF4GQ14541 408 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 OR52W1Q6IF63 320 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 ADAM5Q6NVV9 412 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 C1orf87Q8N0U7 546 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 MUC15Q8N387 334 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 FSTL5Q8N475 847 aaPredicted RBP8.28□□□□□ -1.08
VPS13D-212ENST00000543766 CCDC115Q96NT0 180 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 TP53RKQ96S44 253 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 THAP7Q9BT49 309 aaPredicted RBP8.28□□□□□ -1.08
VPS13D-212ENST00000543766 TM6SF2Q9BZW4 377 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 C1orf109Q9NX04 203 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 TAS2R13Q9NYV9 303 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 LHX6Q9UPM6 363 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 WNT6Q9Y6F9 365 aa8.28□□□□□ -1.08
VPS13D-212ENST00000543766 A0A087WZY1 265 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 PRSS37A4D1T9 235 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 WTIPA6NIX2 430 aaPredicted RBP8.27□□□□□ -1.09
VPS13D-212ENST00000543766 GOSR2O14653 212 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 TP53I11O14683 189 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 FABP7O15540 132 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 SNAPC5O75971 98 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 DDNO94850 711 aaPredicted RBP8.27□□□□□ -1.09
VPS13D-212ENST00000543766 SBF1O95248 1867 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 GPIP06744 558 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 THP07101 528 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 SRP9P49458 86 aaKnown RBP8.27□□□□□ -1.09
VPS13D-212ENST00000543766 BTN3A2P78410 334 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 PITPNAQ00169 270 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 MEP1BQ16820 701 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 FBXW9Q5XUX1 488 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 ADIPOR2Q86V24 386 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 FAM58AQ8N1B3 248 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 CXorf40AQ8TE69 158 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 GPX8Q8TED1 209 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 MIB2Q96AX9 1013 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 SLC46A1Q96NT5 459 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 SGIP1Q9BQI5 828 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 SDCBP2Q9H190 292 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 TMEM8AQ9HCN3 771 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 OR2S2Q9NQN1 319 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 TMPRSS4Q9NRS4 437 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 PIGVQ9NUD9 493 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 GABRQQ9UN88 632 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 SNED1Q8TER0 1413 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 A0A087WZ62 844 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 C4orf47A7E2U8 309 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 C5orf58C9J3I9 102 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 HRO43593 1189 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 DCNP07585 359 aaKnown RBP8.27□□□□□ -1.09
VPS13D-212ENST00000543766 FGF7P21781 194 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 DCTDP32321 178 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 KDELR2P33947 212 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 LHX1P48742 406 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 TTPAP49638 278 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 CTSCP53634 463 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 KLF3P57682 345 aaPredicted RBP8.27□□□□□ -1.09
VPS13D-212ENST00000543766 SMAGPQ0VAQ4 97 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 ECH1Q13011 328 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 SLC10A1Q14973 349 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 LRRC26Q2I0M4 334 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 DUSP28Q4G0W2 176 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 ALKAL2Q6UX46 152 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 TMEM199Q8N511 208 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 OR5M9Q8NGP3 310 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 MAFAQ8NHW3 353 aaPredicted RBP8.27□□□□□ -1.09
VPS13D-212ENST00000543766 KAT5Q92993 513 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 RCN3Q96D15 328 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 SFRP2Q96HF1 295 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 FUNDC2Q9BWH2 189 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 BOCQ9BWV1 1114 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 ARV1Q9H2C2 271 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 FN3KQ9H479 309 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 PLEKHA1Q9HB21 404 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 SEBOXQ9HB31 216 aaPredicted RBP8.27□□□□□ -1.09
VPS13D-212ENST00000543766 MMP25Q9NPA2 562 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 UBE2TQ9NPD8 197 aaPredicted RBP8.27□□□□□ -1.09
VPS13D-212ENST00000543766 TRAV25A0A0B4J276 109 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 TMEM218A2RU14 115 aa8.27□□□□□ -1.09
VPS13D-212ENST00000543766 C5orf52A6NGY3 159 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms