RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 UQCRBP14927 111 aa15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 FKBP2P26885 142 aaKnown RBP15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 AGTR1P30556 359 aa15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 CSNK2A1P68400 391 aaPredicted RBP15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 GRINAQ7Z429 371 aa15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 HMGN2P46Q86SG4 172 aa15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 PEX5LQ8IYB4 626 aa15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 ABHD3Q8WU67 409 aa15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 WDR60Q8WVS4 1066 aa15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 VPS33AQ96AX1 596 aa15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 ZNF524Q96C55 264 aa15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 FOXC2Q99958 501 aa15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 RAD21L1Q9H4I0 556 aa15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 C12orf49Q9H741 205 aa15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 CACYBPQ9HB71 228 aaKnown RBP15.31■□□□□ 0.04
CACNA2D4-211ENST00000540728 YES1P07947 543 aa15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 PPP3CBP16298 524 aa15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 ENPP1P22413 925 aa15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 HTR3AP46098 478 aa15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 MRPL19P49406 292 aaKnown RBP15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 IDH3AP50213 366 aa15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 CRISP3P54108 245 aa15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 AQP5P55064 265 aa15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 RIPPLY3P57055 190 aa15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 DSTNP60981 165 aa15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 MAP1AP78559 2803 aaPredicted RBP15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 KEAP1Q14145 624 aa15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 SYT14P1Q58G82 188 aa15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 CNOT9Q92600 299 aaKnown RBP15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 SLC6A13Q9NSD5 602 aa15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 KLHL9Q9P2J3 617 aa15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 KLHL13Q9P2N7 655 aa15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 SETD2Q9BYW2 2564 aaPredicted RBP15.3■□□□□ 0.04
CACNA2D4-211ENST00000540728 CLDN24A6NM45 220 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 SULT2B1O00204 365 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 RAF1P04049 648 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 ETFAP13804 333 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 NID1P14543 1247 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 CRYGSP22914 178 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 CCKARP32238 428 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 IDH2P48735 452 aaKnown RBP15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 IRX1P78414 480 aaPredicted RBP15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 ANKRD34AQ69YU3 496 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 TMPPEQ6ZT21 453 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 ZNF550Q7Z398 422 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 TUSC5Q8IXB3 177 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 ZNF440Q8IYI8 595 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 GTF2H4Q92759 462 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 ZHX1-C8orf76Q96EF9 292 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 ZC3HAV1LQ96H79 300 aaKnown RBP15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 EBF4Q9BQW3 602 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 CCDC106Q9BWC9 280 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 PLEKHF2Q9H8W4 249 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 CTPS2Q9NRF8 586 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 C6orf203Q9P0P8 240 aaPredicted RBP15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 CHRNA9Q9UGM1 479 aa15.29■□□□□ 0.04
CACNA2D4-211ENST00000540728 IGHV3-15A0A0B4J1V0 119 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 BCAS1O75363 584 aaPredicted RBP15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 BCHEP06276 602 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 RPS4Y1P22090 263 aaKnown RBP15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 CLK1P49759 484 aaKnown RBP15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 DIO1P49895 249 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 MVDP53602 400 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 RASGEF1BQ0VAM2 473 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 ZSWIM7Q19AV6 140 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 GTDC1Q4AE62 458 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 LIN52Q52LA3 116 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 MRPL2Q5T653 305 aaKnown RBP15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 STAC2Q6ZMT1 411 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 PIK3IP1Q96FE7 263 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 AURKBQ96GD4 344 aaPredicted RBP15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 MAGEB18Q96M61 343 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 ARMC7Q9H6L4 198 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 ZNF232Q9UNY5 417 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 GPR52Q9Y2T5 361 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 HDGFL3Q9Y3E1 203 aa15.28■□□□□ 0.04
CACNA2D4-211ENST00000540728 CFAP73A6NFT4 308 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 CLIC1O00299 241 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 TFPTP0C1Z6 253 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 FADDQ13158 208 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 LARS2Q15031 903 aaKnown RBP15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 SLC2A7Q6PXP3 512 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 BLOC1S3Q6QNY0 202 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 NUFIP2Q7Z417 695 aaKnown RBP15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 OR52P1PQ8NH57 321 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 SLC38A5Q8WUX1 472 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 CKAP2Q8WWK9 683 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 SPDL1Q96EA4 605 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 ALPK1Q96QP1 1244 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 HDHD5Q9BXW7 423 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 PAIP1Q9H074 479 aaKnown RBP15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 OR10A4Q9H209 315 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 CXXC4Q9H2H0 198 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 BCO1Q9HAY6 547 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 TMEM45AQ9NWC5 275 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 CCDC167Q9P0B6 97 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 PRDM4Q9UKN5 801 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 PCDHB14Q9Y5E9 798 aa15.27■□□□□ 0.04
CACNA2D4-211ENST00000540728 A0A096LPI6 279 aa15.26■□□□□ 0.03
CACNA2D4-211ENST00000540728 A0A0G2JPF8 293 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms