RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 GSAPA4D1B5 854 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 SUPT3HB4E1H0 165 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 NPIPB8E9PQR5 432 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 F5H5P2 479 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 DVL2O14641 736 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 ADAM10O14672 748 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 PHOX2AO14813 284 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 SMPD2O60906 423 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 BCKDHAP12694 445 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 MNDAP41218 407 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 AGTR2P50052 363 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 CDH12P55289 794 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 SNRPGP62308 76 aaKnown RBP8.79□□□□□ -1
CLIP1-214ENST00000540539 TAP2Q03519 686 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 DYRK1AQ13627 763 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 MEF2DQ14814 521 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 RBBP7Q16576 425 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 TTLL9Q3SXZ7 439 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 ACTBL2Q562R1 376 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 CRB2Q5IJ48 1285 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 JMJD6Q6NYC1 403 aaPredicted RBP8.79□□□□□ -1
CLIP1-214ENST00000540539 NCEH1Q6PIU2 408 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 DOK6Q6PKX4 331 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 CEACAM20Q6UY09 585 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 LINGO2Q7L985 606 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 FBXO39Q8N4B4 442 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 TTC16Q8NEE8 873 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 OR52B4Q8NGK2 314 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 OR52I1Q8NGK6 324 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 LCN9Q8WX39 176 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 TRMT61BQ9BVS5 477 aaKnown RBP8.79□□□□□ -1
CLIP1-214ENST00000540539 ELOVL4Q9GZR5 314 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 TMEM185BQ9H7F4 350 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 RPS10P5Q9NQ39 176 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 TREX1Q9NSU2 369 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 MRPL15Q9P015 296 aaKnown RBP8.79□□□□□ -1
CLIP1-214ENST00000540539 DOK5Q9P104 306 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 AAR2Q9Y312 384 aaKnown RBP8.79□□□□□ -1
CLIP1-214ENST00000540539 MRPS23Q9Y3D9 190 aaKnown RBP8.79□□□□□ -1
CLIP1-214ENST00000540539 PIKFYVEQ9Y2I7 2098 aa8.79□□□□□ -1
CLIP1-214ENST00000540539 A0A0U1RQV5 110 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 SYNDIG1LA6NDD5 238 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 TLR4O00206 839 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 GABRPO00591 440 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 SH3BGRLO75368 114 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 SRPRAP08240 638 aaKnown RBP8.78□□□□□ -1
CLIP1-214ENST00000540539 SMIM10L2AP0DMW4 78 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 SMIM10L2BP0DMW5 78 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 PRPS1L1P21108 318 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 THBS4P35443 961 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 SOX18P35713 384 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 NDUFV1P49821 464 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 CRYBA2P53672 197 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 VMACQ2NL98 169 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 TMEM95Q3KNT9 176 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 MESTQ5EB52 335 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 ARSJQ5FYB0 599 aaPredicted RBP8.78□□□□□ -1
CLIP1-214ENST00000540539 NKAPLQ5M9Q1 402 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 LRIF1Q5T3J3 769 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 FBXW9Q5XUX1 488 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 OR10K2Q6IF99 312 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 PARGQ86W56 976 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 NPAS4Q8IUM7 802 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 ZNF664Q8N3J9 261 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 FAM24BQ8N5W8 94 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 OR1N1Q8NGS0 311 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 OR5R1Q8NH85 324 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 GPR148Q8TDV2 347 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 EDEM1Q92611 657 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 CCDC74BQ96LY2 380 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 CDK15Q96Q40 435 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 TMEM106CQ9BVX2 250 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 DUSP16Q9BY84 665 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 TAS2R5Q9NYW4 299 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 OR14J1Q9UGF5 321 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 PCDHB1Q9Y5F3 818 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 STYXL1Q9Y6J8 313 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 A0A1W2PPQ1 181 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 TBC1D3FA6NER0 549 aaPredicted RBP8.78□□□□□ -1
CLIP1-214ENST00000540539 ANKRD61A6NGH8 418 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 CD8B2A6NJW9 211 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 SEC14L6B5MCN3 397 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 FGF16O43320 207 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 SCN2BO60939 215 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 EFCAB14O75071 495 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 NFATC1O95644 943 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 IFNA17P01571 189 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 SERPINA5P05154 406 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 BCHEP06276 602 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 UCHL1P09936 223 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 SFTA3P0C7M3 94 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 NR2F6P10588 404 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 CD8BP10966 210 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 HOXB9P17482 250 aaPredicted RBP8.78□□□□□ -1
CLIP1-214ENST00000540539 NDUFV2P19404 249 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 GJA4P35212 333 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 MMP15P51511 669 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 ART1P52961 327 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 CRISP1P54107 249 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 RPL38P63173 70 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms