RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 VOPP1Q96AW1 172 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 TIMP4Q99727 224 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 MAPKAP1Q9BPZ7 522 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 CALHM2Q9HA72 323 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 GSN-AS1Q9NRJ2 163 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 ELOVL5Q9NYP7 299 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 CBLCQ9ULV8 474 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 LIPT1Q9Y234 373 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 A0A1W2PRG6 482 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 CD8B2A6NJW9 211 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 EVPLLA8MZ36 301 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 H3BMQ9 156 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 RBBP9O75884 186 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 PRDX6P30041 224 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 WNT3P56703 355 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 UBE2NP61088 152 aaKnown RBP6.9□□□□□ -1.3
GNE-205ENST00000539815 SNRPD2P62316 118 aaKnown RBP6.9□□□□□ -1.3
GNE-205ENST00000539815 IRF9Q00978 393 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 FRG1Q14331 258 aaKnown RBP6.9□□□□□ -1.3
GNE-205ENST00000539815 C6orf10Q5SRN2 563 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 ATG16L1Q676U5 607 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 TMEM81Q6P7N7 255 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 KLHL36Q8N4N3 616 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 OR4D10Q8NGI6 311 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 NT5CQ8TCD5 201 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 GPR151Q8TDV0 419 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 TSPEARQ8WU66 669 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 YIPF5Q969M3 257 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 ZBTB18Q99592 522 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 WDR83Q9BRX9 315 aaKnown RBP6.9□□□□□ -1.3
GNE-205ENST00000539815 P2RY12Q9H244 342 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 DSN1Q9H410 356 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 MYNNQ9NPC7 610 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 ZNF358Q9NW07 568 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 HRH3Q9Y5N1 445 aa6.9□□□□□ -1.3
GNE-205ENST00000539815 A0A1W2PPV9 198 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 NR2C1P13056 603 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 PTAFRP25105 342 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 SFTPDP35247 375 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 ALDH3B2P48448 385 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 MEOX2P50222 304 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 RIDAP52758 137 aaKnown RBP6.9□□□□□ -1.31
GNE-205ENST00000539815 ABCE1P61221 599 aaKnown RBP6.9□□□□□ -1.31
GNE-205ENST00000539815 PON3Q15166 354 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 PFKFB4Q16877 469 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 KHDRBS2Q5VWX1 349 aaKnown RBP6.9□□□□□ -1.31
GNE-205ENST00000539815 LRRC70Q7Z2Q7 622 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 GALNT5Q7Z7M9 940 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 SH3YL1Q96HL8 342 aaPredicted RBP6.9□□□□□ -1.31
GNE-205ENST00000539815 LCORQ96JN0 433 aaPredicted RBP6.9□□□□□ -1.31
GNE-205ENST00000539815 JMJD8Q96S16 334 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 RBM4BQ9BQ04 359 aaKnown RBP6.9□□□□□ -1.31
GNE-205ENST00000539815 RBM4Q9BWF3 364 aaKnown RBP6.9□□□□□ -1.31
GNE-205ENST00000539815 OR10A5Q9H207 317 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 EQTNQ9NQ60 294 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 VDAC3Q9Y277 283 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 AP4B1Q9Y6B7 739 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 SCN2AQ99250 2005 aa6.9□□□□□ -1.31
GNE-205ENST00000539815 SCDO00767 359 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 BCL10O95999 233 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 TGFAP01135 160 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 C1QAP02745 245 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 CELA3AP09093 270 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 OPRL1P41146 370 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 PTH2RP49190 550 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 CLDN15P56746 228 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 DSCR9P59020 149 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 NAB1Q13506 487 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 RUNX2Q13950 521 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 TIGD6Q17RP2 521 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 ATAD3CQ5T2N8 411 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 HES5Q5TA89 166 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 H3F3CQ6NXT2 135 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 BHLHB9Q6PI77 547 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 TMEM108Q6UXF1 575 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 SIAH3Q8IW03 269 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 METTL6Q8TCB7 284 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 FBXO17Q96EF6 278 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 SNX18Q96RF0 628 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 KLHL31Q9H511 634 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 LANCL2Q9NS86 450 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 FAM212BQ9NTI7 297 aaPredicted RBP6.89□□□□□ -1.31
GNE-205ENST00000539815 SH3BP4Q9P0V3 963 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 METRNQ9UJH8 293 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 CNOT11Q9UKZ1 510 aaKnown RBP6.89□□□□□ -1.31
GNE-205ENST00000539815 BCAS1O75363 584 aaPredicted RBP6.89□□□□□ -1.31
GNE-205ENST00000539815 IL6P05231 212 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 CASP2P42575 452 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 DLX5P56178 289 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 ZNF45Q02386 682 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 SLC29A2Q14542 456 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 MORF4L2Q15014 288 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 PIGGQ5H8A4 983 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 GPR107Q5VW38 600 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 PRSS57Q6UWY2 283 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 LRRC75A-AS1Q8N1F1 130 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 ZCCHC7Q8N3Z6 543 aaKnown RBP6.89□□□□□ -1.31
GNE-205ENST00000539815 ZNF321PQ8N8H1 164 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 OR56A3Q8NH54 315 aa6.89□□□□□ -1.31
GNE-205ENST00000539815 LRRC39Q96DD0 335 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms