RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 C1QTNF7Q9BXJ2 289 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 ZNF436Q9C0F3 470 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-209ENST00000539584 BRD7Q9NPI1 651 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 C20orf141Q9NUB4 165 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 SPEF1Q9Y4P9 236 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 OR1A2Q9Y585 309 aa12.26□□□□□ -0.45
UBE3B-209ENST00000539584 NOTCH4Q99466 2003 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 AGRPO00253 132 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 B3GALT2O43825 422 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 ATP1B1P05026 303 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 CPN1P15169 458 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 ATF1P18846 271 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 C5AR1P21730 350 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 DRD5P21918 477 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 NOS3P29474 1203 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 LCN1P31025 176 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 ACVR1BP36896 505 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 GDI2P50395 445 aaKnown RBP12.25□□□□□ -0.45
UBE3B-209ENST00000539584 CCR9P51686 369 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 SIRPAP78324 504 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 CRMP1Q14194 572 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 ST3GAL2Q16842 350 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 CDONQ4KMG0 1287 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 SMUG1Q53HV7 270 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 SEZ6L2Q6UXD5 910 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 UNQ9370/PRO34162Q6UXP9 181 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 THSD4Q6ZMP0 1018 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 NUDT18Q6ZVK8 323 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 VN1R4Q7Z5H5 301 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 GRAMD2AQ8IUY3 354 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 LRRC20Q8TCA0 184 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 COL26A1Q96A83 441 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 TM4SF19Q96DZ7 209 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 ZFP3Q96NJ6 502 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 MYADMQ96S97 322 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 ZNF426Q9BUY5 554 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 LYRM4Q9HD34 91 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 MAT2BQ9NZL9 334 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 DAPP1Q9UN19 280 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 KCNK6Q9Y257 313 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 SPACA6W5XKT8 324 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 A0A1B0GUH1 482 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 ZC3H12DA2A288 527 aaKnown RBP12.25□□□□□ -0.45
UBE3B-209ENST00000539584 GABARAPH6UMI1 98 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 ZNF593O00488 134 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-209ENST00000539584 IFNA16P05015 189 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 CEACAM5P06731 702 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 RRASP10301 218 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 HOXB3P14651 431 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-209ENST00000539584 IL9P15248 144 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 ZNF81P51508 661 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 RPS21P63220 83 aaKnown RBP12.25□□□□□ -0.45
UBE3B-209ENST00000539584 DGCR2P98153 550 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 CST6Q15828 149 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 SLC35D3Q5M8T2 416 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 FHL5Q5TD97 284 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 OR6V1Q8N148 313 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 SPICQ8N5J4 248 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 COX18Q8N8Q8 333 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 ZNF671Q8TAW3 534 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 POF1BQ8WVV4 589 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 SCARF2Q96GP6 870 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-209ENST00000539584 GSDMCQ9BYG8 508 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 GSX2Q9BZM3 304 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 TRIM2Q9C040 744 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 SPRTNQ9H040 489 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-209ENST00000539584 ENKD1Q9H0I2 346 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 RNF208Q9H0X6 261 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 C20orf85Q9H1P6 137 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 RSPH9Q9H1X1 276 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-209ENST00000539584 OBP2AQ9NY56 170 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 SPHK1Q9NYA1 384 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 KIF25Q9UIL4 384 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 PCDHGA9Q9Y5G4 932 aaKnown RBP12.25□□□□□ -0.45
UBE3B-209ENST00000539584 SLC22A7Q9Y694 548 aa12.25□□□□□ -0.45
UBE3B-209ENST00000539584 LOC105369274A0A096LPK9 316 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 A0A0B4J2E0 115 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 A0A1B0GX12 115 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 RPS10-NUDT3A0A1W2PQS6 291 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 BRINP1O60477 761 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 LDOC1O95751 146 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-209ENST00000539584 STATHP02808 62 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 ZNF888P0CJ79 500 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-209ENST00000539584 PSMB1P20618 241 aaKnown RBP12.24□□□□□ -0.45
UBE3B-209ENST00000539584 GDNFP39905 211 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 TAGLNQ01995 201 aaKnown RBP12.24□□□□□ -0.45
UBE3B-209ENST00000539584 DHODHQ02127 395 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 SGCGQ13326 291 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 EXOSC2Q13868 293 aaKnown RBP12.24□□□□□ -0.45
UBE3B-209ENST00000539584 FGFBP1Q14512 234 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 ISXQ2M1V0 245 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 DEFB115Q30KQ5 88 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 ABHD13Q7L211 337 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 OR4N4Q8N0Y3 316 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 OR13C2Q8NGS9 318 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 OR5J2Q8NH18 312 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 RSPRY1Q96DX4 576 aa12.24□□□□□ -0.45
UBE3B-209ENST00000539584 CNN2Q99439 309 aaKnown RBP12.24□□□□□ -0.45
UBE3B-209ENST00000539584 C6orf106Q9H6K1 298 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-209ENST00000539584 C12orf10Q9HB07 376 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms