RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 SC5DO75845 299 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 SPDEFO95238 335 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 RSU1Q15404 277 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 RPE65Q16518 533 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 VWA2Q5GFL6 755 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 OTUD1Q5VV17 481 aaPredicted RBP13.57□□□□□ -0.24
CACNB1-206ENST00000539338 ENTHD1Q8IYW4 607 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 OR13C2Q8NGS9 318 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 OR9A4Q8NGU2 314 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 NECAB3Q96P71 396 aaPredicted RBP13.57□□□□□ -0.24
CACNB1-206ENST00000539338 CENPOQ9BU64 300 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 FOXQ1Q9C009 403 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 PSORS1C1Q9UIG5 152 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 RPH3AQ9Y2J0 694 aaPredicted RBP13.57□□□□□ -0.24
CACNB1-206ENST00000539338 GABRPO00591 440 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 RAB3DO95716 219 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 MMP2P08253 660 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 MTHFD2P13995 350 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 ITGB8P26012 769 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 GIFP27352 417 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 ZNF616Q08AN1 781 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 ZMYND11Q15326 602 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 RHEBQ15382 184 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 AGAP6Q5VW22 663 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 ZNF767PQ75MW2 155 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 AGAP4Q96P64 663 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 BRINP1O60477 761 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 MPIG6BO95866 241 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 ALDOBP05062 364 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 AQP2P41181 271 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 MRPL49Q13405 166 aaKnown RBP13.57□□□□□ -0.24
CACNB1-206ENST00000539338 EFR3AQ14156 821 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 MRPL2Q5T653 305 aaKnown RBP13.57□□□□□ -0.24
CACNB1-206ENST00000539338 METTL11BQ5VVY1 283 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 ZNF417Q8TAU3 575 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 TIMM29Q9BSF4 260 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 RBM24Q9BX46 236 aaKnown RBP13.57□□□□□ -0.24
CACNB1-206ENST00000539338 CPNE7Q9UBL6 633 aa13.57□□□□□ -0.24
CACNB1-206ENST00000539338 C4orf47A7E2U8 309 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 IL1AP01583 271 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 PTPN6P29350 595 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 ARF3P61204 181 aaPredicted RBP13.56□□□□□ -0.24
CACNB1-206ENST00000539338 ARF1P84077 181 aaKnown RBP13.56□□□□□ -0.24
CACNB1-206ENST00000539338 DNAJC5GQ8N7S2 189 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 BEST4Q8NFU0 473 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 INTS14Q96SY0 518 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 NIPSNAP1Q9BPW8 284 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 SLA2Q9H6Q3 261 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 KNG1P01042 644 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 OPN1LWP04000 364 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 IL9P15248 144 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 TUBG1P23258 451 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 GPR19Q15760 415 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 SMAD2Q15796 467 aaKnown RBP13.56□□□□□ -0.24
CACNB1-206ENST00000539338 OLIG3Q7RTU3 272 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 SCGB1C1Q8TD33 95 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 RFPL3O75679 317 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 CRTAPO75718 401 aaPredicted RBP13.56□□□□□ -0.24
CACNB1-206ENST00000539338 UGT2B7P16662 529 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 CSNK2A1P68400 391 aaPredicted RBP13.56□□□□□ -0.24
CACNB1-206ENST00000539338 TSPAN31Q12999 210 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 OR7A5Q15622 319 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 FAM109BQ6ICB4 259 aaPredicted RBP13.56□□□□□ -0.24
CACNB1-206ENST00000539338 ZNF322Q6U7Q0 402 aaPredicted RBP13.56□□□□□ -0.24
CACNB1-206ENST00000539338 BCDIN3DQ7Z5W3 292 aaKnown RBP13.56□□□□□ -0.24
CACNB1-206ENST00000539338 NRARPQ7Z6K4 114 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 FAM83FQ8NEG4 500 aaPredicted RBP13.56□□□□□ -0.24
CACNB1-206ENST00000539338 CSNK2A3Q8NEV1 391 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 UBE2FQ969M7 185 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 OR5B2Q96R09 309 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 A8MVJ9 347 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 YY2O15391 372 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 GPR75O95800 540 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 PCSK6P29122 969 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 CRABP1P29762 137 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 RPS25P62851 125 aaKnown RBP13.56□□□□□ -0.24
CACNB1-206ENST00000539338 KCNJ10P78508 379 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 C3orf33Q6P1S2 294 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 KCTD20Q7Z5Y7 419 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 LAX1Q8IWV1 398 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 BTBD2Q9BX70 525 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 TMEM30AQ9NV96 361 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 ICKQ9UPZ9 632 aa13.56□□□□□ -0.24
CACNB1-206ENST00000539338 MEGF11A6BM72 1044 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 LIPCP11150 499 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 PFN3P60673 137 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 SRYQ05066 204 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 HYAL1Q12794 435 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 PARM1Q6UWI2 310 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 ZNF765Q7L2R6 523 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 KIF18BQ86Y91 864 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 ZNF100Q8IYN0 542 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 OR5M11Q96RB7 305 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 FN3KQ9H479 309 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 RGCCQ9H4X1 137 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 UBE2J1Q9Y385 318 aaPredicted RBP13.55□□□□□ -0.24
CACNB1-206ENST00000539338 DOCK2Q92608 1830 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 C17orf113A0A1B0GUU1 675 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 F5H5P2 479 aa13.55□□□□□ -0.24
CACNB1-206ENST00000539338 BPNT1O95861 308 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms