RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SH2D1BO14796 132 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 CHMP2AO43633 222 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 BUB3O43684 328 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 LYPLA1O75608 230 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 AQP8O94778 261 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 HSMCR30P0CW71 290 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 CAPN2P17655 700 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 HNF1AP20823 631 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 HNRNPA2B1P22626 353 aaKnown RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 OMGP23515 440 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 BDKRB1P46663 353 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 STK19P49842 368 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 EFNB2P52799 333 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 CLDN8P56748 225 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ERVK11-1P61568 191 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 RPS14P62263 151 aaKnown RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 CDR2Q01850 454 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF33BQ06732 778 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 RAB40BQ12829 278 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 TFDP1Q14186 410 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ARL6IP1Q15041 203 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 VAMP3Q15836 100 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 KLHL38Q2WGJ6 581 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 GTDC1Q4AE62 458 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 C14orf177Q52M58 125 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 SBK1Q52WX2 424 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 GPAT3Q53EU6 434 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF506Q5JVG8 444 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 THEM4Q5T1C6 240 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ZC2HC1BQ5TFG8 222 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 STPG1Q5TH74 334 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 NCR3LG1Q68D85 454 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ASPHD2Q6ICH7 369 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 SH2D5Q6ZV89 423 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 Q71RC1 249 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 NUFIP2Q7Z417 695 aaKnown RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ANKFN1Q8N957 763 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 C8orf31Q8N9H6 132 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 VN1R2Q8NFZ6 395 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 OR9Q2Q8NGE9 314 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 OR5L2Q8NGL0 311 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 OR2T6Q8NHC8 308 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 PAQR8Q8TEZ7 354 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 PHYHIPQ92561 330 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 PRICKLE1Q96MT3 831 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 FOXN4Q96NZ1 517 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 MTMR9Q96QG7 549 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 SMIM14Q96QK8 99 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 THUMPD2Q9BTF0 503 aaKnown RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ALG12Q9BV10 488 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 AZI2Q9H6S1 392 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 METTL7AQ9H8H3 244 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ESM1Q9NQ30 184 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 GPATCH2LQ9NWQ4 482 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 MEMO1Q9Y316 297 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 SLC6A5Q9Y345 797 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 FRMPD4Q14CM0 1322 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 CENPJQ9HC77 1338 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 NISCHQ9Y2I1 1504 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 LOC100653049A0A140TA62 436 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 KRTAP16-1A8MUX0 517 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF99A8MXY4 864 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 E7EWF7 191 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 FBP2O00757 339 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 OGTO15294 1046 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 PHF1O43189 567 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 PI15O43692 258 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 GATCO43716 136 aaKnown RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 NMT2O60551 498 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 HSF2BPO75031 334 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 SNNO75324 88 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 WBP4O75554 376 aaKnown RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 KRT34O76011 436 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 IGLV2-11P01706 119 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 IDSP22304 550 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 CAPGP40121 348 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 GNPDA1P46926 289 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 KLRB1Q12918 225 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ATXN7L3Q14CW9 347 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 PCK2Q16822 640 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 GGTA1PQ4G0N0 100 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 IRAK1BP1Q5VVH5 260 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 RAET1LQ5VY80 246 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 RNF130Q86XS8 419 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 TMEM123Q8N131 208 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 RPRMLQ8N4K4 120 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 SPATA4Q8NEY3 305 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 OR10G3Q8NGC4 313 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 CD101Q93033 1021 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 RASD2Q96D21 266 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ATXN7L3BQ96GX2 97 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 HSD17B14Q9BPX1 270 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 KRTAP2-2Q9BYT5 123 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 GPR61Q9BZJ8 451 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 NAT10Q9H0A0 1025 aaKnown RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 CLSTN2Q9H4D0 955 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 UCK1Q9HA47 277 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 PLEKHA3Q9HB20 300 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 NRN1Q9NPD7 142 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms