RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 CSNK2A1P68400 391 aaPredicted RBP10.31□□□□□ -0.76
RTN3-209ENST00000538995 PLAURQ03405 335 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 ZSWIM7Q19AV6 140 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 SYT14P1Q58G82 188 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 COX20Q5RI15 118 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 PEX5LQ8IYB4 626 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 ZNF440Q8IYI8 595 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 OR9I1Q8NGQ6 314 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 ZNF563Q8TA94 476 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 PNPT1Q8TCS8 783 aaKnown RBP10.31□□□□□ -0.76
RTN3-209ENST00000538995 WDR60Q8WVS4 1066 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 DYDC1Q8WWB3 177 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 ROBO4Q8WZ75 1007 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 ZG16BQ96DA0 208 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 ALPK1Q96QP1 1244 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 OR5B2Q96R09 309 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 QRSL1Q9H0R6 528 aaKnown RBP10.31□□□□□ -0.76
RTN3-209ENST00000538995 RAD21L1Q9H4I0 556 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 TPT1P8Q9HAU6 139 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 BCO1Q9HAY6 547 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 SLCO1B3Q9NPD5 702 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 SLC6A13Q9NSD5 602 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 KLHL28Q9NXS3 571 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 CHRNA9Q9UGM1 479 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 MTORP42345 2549 aa10.31□□□□□ -0.76
RTN3-209ENST00000538995 TMEM247A6NEH6 219 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 DEFB108AA8MXU0 73 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 CYTIPO60759 359 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 ATE1O95260 518 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 YES1P07947 543 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 IL7RP16871 459 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 ENPP1P22413 925 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 CRATP43155 626 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 IDH3AP50213 366 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 ATP4BP51164 291 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 DSTNP60981 165 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 PPP2R2AP63151 447 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 FADDQ13158 208 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 EXOC3L2Q2M3D2 409 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 LIN52Q52LA3 116 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 C6orf10Q5SRN2 563 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 PRAMEF8Q5VWM4 474 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 PRAMEF7Q5VXH5 474 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 TFAP2EQ6VUC0 442 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 STAC2Q6ZMT1 411 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 TMPPEQ6ZT21 453 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 ATP6V1C2Q8NEY4 427 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 CNOT9Q92600 299 aaKnown RBP10.3□□□□□ -0.76
RTN3-209ENST00000538995 GTF2H4Q92759 462 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 VPS33AQ96AX1 596 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 PSD2Q9BQI7 771 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 KLHL4Q9C0H6 718 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 LIME1Q9H400 295 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 CCM2LQ9NUG4 571 aaPredicted RBP10.3□□□□□ -0.76
RTN3-209ENST00000538995 INTS9Q9NV88 658 aaKnown RBP10.3□□□□□ -0.76
RTN3-209ENST00000538995 PLEKHA6Q9Y2H5 1048 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 GPR52Q9Y2T5 361 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 HDGFL3Q9Y3E1 203 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 ITPR3Q14573 2671 aa10.3□□□□□ -0.76
RTN3-209ENST00000538995 MPDZO75970 2070 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 A0A096LPI6 279 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 A0A1W2PNR3 127 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 CFAP73A6NFT4 308 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 CLDN24A6NM45 220 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 ZNF724A8MTY0 619 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 SULT2B1O00204 365 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 SMAD9O15198 467 aaKnown RBP10.29□□□□□ -0.76
RTN3-209ENST00000538995 SIAH2O43255 324 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 PMS2P2O95744 297 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 THBS1P07996 1170 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 TFPTP0C1Z6 253 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 BMP2P12643 396 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 ETFAP13804 333 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 HOXB9P17482 250 aaPredicted RBP10.29□□□□□ -0.76
RTN3-209ENST00000538995 RYKP34925 604 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 DIO1P49895 249 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 AQP5P55064 265 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 KEAP1Q14145 624 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 PDK3Q15120 406 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 POU4F3Q15319 338 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 MAPK11Q15759 364 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 GTDC1Q4AE62 458 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 MRPL2Q5T653 305 aaKnown RBP10.29□□□□□ -0.76
RTN3-209ENST00000538995 RNF220Q5VTB9 566 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 ABLIM2Q6H8Q1 611 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 BLOC1S3Q6QNY0 202 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 ZNF550Q7Z398 422 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 TUSC5Q8IXB3 177 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 STEAP2Q8NFT2 490 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 SLC38A5Q8WUX1 472 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 ZHX1-C8orf76Q96EF9 292 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 USB1Q9BQ65 265 aaKnown RBP10.29□□□□□ -0.76
RTN3-209ENST00000538995 EBF4Q9BQW3 602 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 HDHD5Q9BXW7 423 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 PAIP1Q9H074 479 aaKnown RBP10.29□□□□□ -0.76
RTN3-209ENST00000538995 C12orf49Q9H741 205 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 CACYBPQ9HB71 228 aaKnown RBP10.29□□□□□ -0.76
RTN3-209ENST00000538995 CTPS2Q9NRF8 586 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 EMC3Q9P0I2 261 aa10.29□□□□□ -0.76
RTN3-209ENST00000538995 ING1Q9UK53 422 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms