RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 ADAM11O75078 769 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 SASH3O75995 380 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 PABPC4LP0CB38 370 aaKnown RBP13.32□□□□□ -0.28
RAB40B-202ENST00000538809 HOXB9P17482 250 aaPredicted RBP13.32□□□□□ -0.28
RAB40B-202ENST00000538809 RPS4Y1P22090 263 aaKnown RBP13.32□□□□□ -0.28
RAB40B-202ENST00000538809 LOXP28300 417 aaPredicted RBP13.32□□□□□ -0.28
RAB40B-202ENST00000538809 RYKP34925 604 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 IDH3AP50213 366 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 POLR2JP52435 117 aaKnown RBP13.32□□□□□ -0.28
RAB40B-202ENST00000538809 RIPPLY3P57055 190 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 ADAM8P78325 824 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 RNPS1Q15287 305 aaKnown RBP13.32□□□□□ -0.28
RAB40B-202ENST00000538809 TSC22D1Q15714 1073 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 GTDC1Q4AE62 458 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 TFAP2EQ6VUC0 442 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 LRRC74BQ6ZQY2 392 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 PLEKHM3Q6ZWE6 761 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 CXorf67Q86X51 503 aaPredicted RBP13.32□□□□□ -0.28
RAB40B-202ENST00000538809 WFDC8Q8IUA0 241 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 WFDC11Q8NEX6 87 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 ZNF563Q8TA94 476 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 ACTR6Q9GZN1 396 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 TCF7L2Q9NQB0 619 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 ACER3Q9NUN7 267 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 LIPT1Q9Y234 373 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 SLC35A3Q9Y2D2 325 aa13.32□□□□□ -0.28
RAB40B-202ENST00000538809 CADP27708 2225 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.31□□□□□ -0.28
RAB40B-202ENST00000538809 FAM234BA2RU67 622 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 SMAD9O15198 467 aaKnown RBP13.31□□□□□ -0.28
RAB40B-202ENST00000538809 PRKD3O94806 890 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 MAGEA8P43361 318 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 RAC3P60763 192 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 KCNJ10P78508 379 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 ALKBH2Q6NS38 261 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.31□□□□□ -0.28
RAB40B-202ENST00000538809 FUNDC1Q8IVP5 155 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 MIER2Q8N344 545 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 CKAP2Q8WWK9 683 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 TMEM234Q8WY98 164 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 CNOT9Q92600 299 aaKnown RBP13.31□□□□□ -0.28
RAB40B-202ENST00000538809 GTF2H4Q92759 462 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 VPS33AQ96AX1 596 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 ZNF300Q96RE9 604 aaPredicted RBP13.31□□□□□ -0.28
RAB40B-202ENST00000538809 PSD2Q9BQI7 771 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 CCDC28BQ9BUN5 200 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 SLC52A3Q9NQ40 469 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 EXOSC3Q9NQT5 275 aaKnown RBP13.31□□□□□ -0.28
RAB40B-202ENST00000538809 CTPS2Q9NRF8 586 aa13.31□□□□□ -0.28
RAB40B-202ENST00000538809 ARGLU1Q9NWB6 273 aaPredicted RBP13.31□□□□□ -0.28
RAB40B-202ENST00000538809 AGAP5A6NIR3 686 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 AP3D1O14617 1153 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 POLR3GO15318 223 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-202ENST00000538809 GCM2O75603 506 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-202ENST00000538809 KRT75O95678 551 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 FESP07332 822 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 TFPIP10646 304 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 PPP3CBP16298 524 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 ANXA11P50995 505 aaKnown RBP13.3□□□□□ -0.28
RAB40B-202ENST00000538809 RASGEF1BQ0VAM2 473 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 SYT14P1Q58G82 188 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 KRTAP1-3Q8IUG1 177 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 ARFGAP2Q8N6H7 521 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 WDR60Q8WVS4 1066 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 STON2Q8WXE9 905 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 PMM1Q92871 262 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 S100PBPQ96BU1 408 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 ZNF775Q96BV0 537 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-202ENST00000538809 AURKBQ96GD4 344 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-202ENST00000538809 ITCHQ96J02 903 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 CCL19Q99731 98 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 CCDC106Q9BWC9 280 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 PAIP1Q9H074 479 aaKnown RBP13.3□□□□□ -0.28
RAB40B-202ENST00000538809 RMND5AQ9H871 391 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 TPT1P8Q9HAU6 139 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 FANCFQ9NPI8 374 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 SERINC1Q9NRX5 453 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-202ENST00000538809 INTS9Q9NV88 658 aaKnown RBP13.3□□□□□ -0.28
RAB40B-202ENST00000538809 BEX4Q9NWD9 120 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-202ENST00000538809 KLHL9Q9P2J3 617 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 ING1Q9UK53 422 aaPredicted RBP13.3□□□□□ -0.28
RAB40B-202ENST00000538809 DSPPQ9NZW4 1301 aa13.3□□□□□ -0.28
RAB40B-202ENST00000538809 SULT2B1O00204 365 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 KLF4O43474 513 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 PLAUP00749 431 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 YES1P07947 543 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 NR2F1P10589 423 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 ETFAP13804 333 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 CCNA2P20248 432 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 PSMB1P20618 241 aaKnown RBP13.29□□□□□ -0.28
RAB40B-202ENST00000538809 EDNRAP25101 427 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 DIO1P49895 249 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 ACKR1Q16570 336 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 BEX5Q5H9J7 111 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 CMIPQ8IY22 773 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 GABRG1Q8N1C3 465 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 SLC43A2Q8N370 569 aa13.29□□□□□ -0.28
RAB40B-202ENST00000538809 SLC25A43Q8WUT9 341 aaPredicted RBP13.29□□□□□ -0.28
RAB40B-202ENST00000538809 PLPPR2Q96GM1 343 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms