RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 SERTAD3Q9UJW9 196 aa12.88□□□□□ -0.35
LIMK1-208ENST00000538333 ICAM5Q9UMF0 924 aa12.88□□□□□ -0.35
LIMK1-208ENST00000538333 OR10H1Q9Y4A9 318 aa12.88□□□□□ -0.35
LIMK1-208ENST00000538333 A0A087WUJ7 227 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 RNF13O43567 381 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 SDC3O75056 442 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 CSTAP01040 98 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 IFNA16P05015 189 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 SBK2P0C263 348 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 HK1P19367 917 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 KCNAB1Q14722 419 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 GRM7Q14831 915 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 KLHL26Q53HC5 615 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 CYB561A3Q8NBI2 242 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 AP3S1Q92572 193 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 TXNDC15Q96J42 360 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 LMF1Q96S06 567 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 TBX5Q99593 518 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 PELOQ9BRX2 385 aaKnown RBP12.87□□□□□ -0.35
LIMK1-208ENST00000538333 ENAMQ9NRM1 1142 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 UCKL1Q9NWZ5 548 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 PRODH2Q9UF12 536 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 CHRNA9Q9UGM1 479 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 MAU2Q9Y6X3 613 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 EML5Q05BV3 1969 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 MPDZO75970 2070 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 DAPL1A0PJW8 107 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 CD8B2A6NJW9 211 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 GTPBP1O00178 669 aaKnown RBP12.87□□□□□ -0.35
LIMK1-208ENST00000538333 DVL2O14641 736 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 CASKO14936 926 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 CD8BP10966 210 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 IL7P13232 177 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 AZGP1P25311 298 aaKnown RBP12.87□□□□□ -0.35
LIMK1-208ENST00000538333 EPHA4P54764 986 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 RPL6Q02878 288 aaKnown RBP12.87□□□□□ -0.35
LIMK1-208ENST00000538333 FNDC7Q5VTL7 733 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 ARHGAP11AQ6P4F7 1023 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 MED25Q71SY5 747 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 SDR16C5Q8N3Y7 309 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 CAMKK1Q8N5S9 505 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 FAM71CQ8NEG0 241 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 OR10H4Q8NGA5 316 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 PTPMT1Q8WUK0 201 aaPredicted RBP12.87□□□□□ -0.35
LIMK1-208ENST00000538333 HPS1Q92902 700 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 ZDHHC12Q96GR4 267 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 HSPA12BQ96MM6 686 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 RPS6KB2Q9UBS0 482 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 ZMIZ1Q9ULJ6 1067 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 LAMA1P25391 3075 aa12.87□□□□□ -0.35
LIMK1-208ENST00000538333 C17orf105B2RV13 164 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 GNB5O14775 395 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 PPM1FP49593 454 aaPredicted RBP12.86□□□□□ -0.35
LIMK1-208ENST00000538333 GPR143P51810 404 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 RPS7P62081 194 aaKnown RBP12.86□□□□□ -0.35
LIMK1-208ENST00000538333 BIKQ13323 160 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 XKRXQ6PP77 449 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 OR7G1Q8NGA0 311 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 SLC2A12Q8TD20 617 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 C3orf49Q96BT1 292 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 SENP5Q96HI0 755 aaPredicted RBP12.86□□□□□ -0.35
LIMK1-208ENST00000538333 AHCYL2Q96HN2 611 aaKnown RBP12.86□□□□□ -0.35
LIMK1-208ENST00000538333 DIRAS2Q96HU8 199 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 ART5Q96L15 291 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 MKKSQ9NPJ1 570 aaPredicted RBP12.86□□□□□ -0.35
LIMK1-208ENST00000538333 SACM1LQ9NTJ5 587 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 GMEB2Q9UKD1 530 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 RNF215Q9Y6U7 377 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 SEC16AO15027 2179 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 C2orf92A0A1B0GVN3 265 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 FABP12A6NFH5 140 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 SNPHO15079 494 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 PRKNO60260 465 aaPredicted RBP12.86□□□□□ -0.35
LIMK1-208ENST00000538333 PIAS2O75928 621 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 NDUFB2O95178 105 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 APOA1P02647 267 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 GYPBP06028 91 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 MRPL3P09001 348 aaKnown RBP12.86□□□□□ -0.35
LIMK1-208ENST00000538333 COL6A3P12111 3177 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 COL5A1P20908 1838 aaPredicted RBP12.86□□□□□ -0.35
LIMK1-208ENST00000538333 SLC16A1P53985 500 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 SLC37A1P57057 533 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 ZNF85Q03923 595 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 NUP210LQ5VU65 1888 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 FAM131AQ6UXB0 335 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 LRRC17Q8N6Y2 441 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 CELF2-AS1Q8N7Q2 184 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 ZNF321PQ8N8H1 164 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 OR5M3Q8NGP4 307 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 KIAA1143Q96AT1 154 aaPredicted RBP12.86□□□□□ -0.35
LIMK1-208ENST00000538333 EFHD2Q96C19 240 aaPredicted RBP12.86□□□□□ -0.35
LIMK1-208ENST00000538333 SGTBQ96EQ0 304 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 LRFN5Q96NI6 719 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 ATF6BQ99941 703 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 SOSTQ9BQB4 213 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 RNF32Q9H0A6 362 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 TRIM36Q9NQ86 728 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 TIGARQ9NQ88 270 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 CUTCQ9NTM9 273 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 MRPS17Q9Y2R5 130 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms