RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 ZNF317Q96PQ6 595 aaPredicted RBP7.93□□□□□ -1.14
USP28-205ENST00000537706 SLC38A2Q96QD8 506 aa7.93□□□□□ -1.14
USP28-205ENST00000537706 ZNF300Q96RE9 604 aaPredicted RBP7.93□□□□□ -1.14
USP28-205ENST00000537706 DOK1Q99704 481 aa7.93□□□□□ -1.14
USP28-205ENST00000537706 CD244Q9BZW8 370 aa7.93□□□□□ -1.14
USP28-205ENST00000537706 MS4A7Q9GZW8 240 aaPredicted RBP7.93□□□□□ -1.14
USP28-205ENST00000537706 ZNF442Q9H7R0 627 aa7.93□□□□□ -1.14
USP28-205ENST00000537706 MOV10Q9HCE1 1003 aaKnown RBP7.93□□□□□ -1.14
USP28-205ENST00000537706 OBP2BQ9NPH6 170 aa7.93□□□□□ -1.14
USP28-205ENST00000537706 PLEK2Q9NYT0 353 aa7.93□□□□□ -1.14
USP28-205ENST00000537706 SH3PXD2BA1X283 911 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 C5orf63A6NC05 138 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 ZNF195O14628 629 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 BANF1O75531 89 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 KCNH1O95259 989 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 TSPAN15O95858 294 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 NGFP01138 241 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 FSHBP01225 129 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 CSF1P09603 554 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 HPGDP15428 266 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 GP5P40197 560 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 ALDH9A1P49189 494 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 ATP4BP51164 291 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 PGGT1BP53609 377 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 SLC18A1P54219 525 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 CRYMQ14894 314 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 PDCD1Q15116 288 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 SLC9A3R2Q15599 337 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 SPANXN3Q5MJ09 141 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 RETREG3Q86VR2 466 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 ANKMY2Q8IV38 441 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 FBXO36Q8NEA4 188 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 DERL2Q9GZP9 239 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 NSRP1Q9H0G5 558 aaKnown RBP7.92□□□□□ -1.14
USP28-205ENST00000537706 TPK1Q9H3S4 243 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 FLRT3Q9NZU0 649 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 TEX264Q9Y6I9 313 aa7.92□□□□□ -1.14
USP28-205ENST00000537706 K7EPI3 171 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 GPR171O14626 319 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 FRS3O43559 492 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 MRPL33O75394 65 aaKnown RBP7.91□□□□□ -1.14
USP28-205ENST00000537706 ESRRBO95718 433 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 ALOX5P09917 674 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 STX2P32856 288 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 MAGEA3P43357 314 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 POU3F1Q03052 451 aaPredicted RBP7.91□□□□□ -1.14
USP28-205ENST00000537706 PDK3Q15120 406 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 HP1BP3Q5SSJ5 553 aaPredicted RBP7.91□□□□□ -1.14
USP28-205ENST00000537706 GKAP1Q5VSY0 366 aaPredicted RBP7.91□□□□□ -1.14
USP28-205ENST00000537706 PDPRQ8NCN5 879 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 ATP6V1C2Q8NEY4 427 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 NUP37Q8NFH4 326 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 CEP70Q8NHQ1 597 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 TRPC4APQ8TEL6 797 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 LRRC39Q96DD0 335 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 ZHX1-C8orf76Q96EF9 292 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 PAFAH2Q99487 392 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 RTN4RQ9BZR6 473 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 MS4A5Q9H3V2 200 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 SSU72Q9NP77 194 aaKnown RBP7.91□□□□□ -1.14
USP28-205ENST00000537706 NECAP2Q9NVZ3 263 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 NKIRAS1Q9NYS0 192 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 TBK1Q9UHD2 729 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 CES1P1Q9UKY3 287 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 CHMP2BQ9UQN3 213 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 TTC36A6NLP5 189 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 POC1B-GALNT4F8VUJ3 575 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 SEC14L2O76054 403 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 NDUFA7O95182 113 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 GSTA2P09210 222 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 EPORP19235 508 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 SHC1P29353 583 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 SSTR1P30872 391 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 ELK3P41970 407 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 SLC18A2Q05940 514 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 ILF2Q12905 390 aaKnown RBP7.91□□□□□ -1.14
USP28-205ENST00000537706 SAMD5Q5TGI4 173 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 CPLX4Q7Z7G2 160 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 FAM9CQ8IZT9 166 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 ZCCHC24Q8N2G6 241 aaKnown RBP7.91□□□□□ -1.14
USP28-205ENST00000537706 B4GALNT2Q8NHY0 566 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 POC1BQ8TC44 478 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 DYDC1Q8WWB3 177 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 EXT2Q93063 718 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 POPDC3Q9HBV1 291 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 ZNF69Q9UC07 566 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 MALT1Q9UDY8 824 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 UTS2RQ9UKP6 389 aa7.91□□□□□ -1.14
USP28-205ENST00000537706 FAM95CA0A1B0GW59 222 aa7.9□□□□□ -1.14
USP28-205ENST00000537706 TCRBV9S1A1TA0A576 114 aa7.9□□□□□ -1.14
USP28-205ENST00000537706 ALG1L2C9J202 215 aa7.9□□□□□ -1.14
USP28-205ENST00000537706 H0YIV9 168 aa7.9□□□□□ -1.14
USP28-205ENST00000537706 PIP5K1CO60331 668 aa7.9□□□□□ -1.14
USP28-205ENST00000537706 NUDT14O95848 222 aa7.9□□□□□ -1.14
USP28-205ENST00000537706 EDNRAP25101 427 aa7.9□□□□□ -1.14
USP28-205ENST00000537706 UBE2NP61088 152 aaKnown RBP7.9□□□□□ -1.14
USP28-205ENST00000537706 ATP6V0D1P61421 351 aa7.9□□□□□ -1.14
USP28-205ENST00000537706 CSNK2A1P68400 391 aaPredicted RBP7.9□□□□□ -1.14
USP28-205ENST00000537706 MRPS11P82912 194 aaKnown RBP7.9□□□□□ -1.14
USP28-205ENST00000537706 FOXF1Q12946 379 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms