RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 NFKBIDQ8NI38 313 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 ZNF563Q8TA94 476 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 TM9SF2Q99805 663 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 BCL2L10Q9HD36 194 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 EXOSC3Q9NQT5 275 aaKnown RBP16.14■□□□□ 0.17
CCDC61-201ENST00000536603 RLIMQ9NVW2 624 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 ZNF232Q9UNY5 417 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 ZFHX3Q15911 3703 aa16.14■□□□□ 0.17
CCDC61-201ENST00000536603 A0A0J9YW62 118 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 FAM221AA4D161 298 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 SLC22A20A6NK97 555 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 ETV2O00321 342 aaPredicted RBP16.13■□□□□ 0.17
CCDC61-201ENST00000536603 ADAM11O75078 769 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 RCBTB2O95199 551 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 PGM3O95394 542 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 NTN1O95631 604 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 KLK2P20151 261 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 BMP5P22003 454 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 ELK4P28324 431 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 SFTPDP35247 375 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 EIF1AXP47813 144 aaKnown RBP16.13■□□□□ 0.17
CCDC61-201ENST00000536603 AGFG1P52594 562 aaKnown RBP16.13■□□□□ 0.17
CCDC61-201ENST00000536603 CDK6Q00534 326 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 TRMT5Q32P41 509 aaKnown RBP16.13■□□□□ 0.17
CCDC61-201ENST00000536603 LIN52Q52LA3 116 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 PRAMEF8Q5VWM4 474 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 PRAMEF7Q5VXH5 474 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 ZNF836Q6ZNA1 936 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 ESPNLQ6ZVH7 1005 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 ZZZ3Q8IYH5 903 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 ATP6V1C2Q8NEY4 427 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 OR10D3Q8NH80 312 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 BBS10Q8TAM1 723 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 TMEM234Q8WY98 164 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 ST8SIA1Q92185 356 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 FIG4Q92562 907 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 INTS12Q96CB8 462 aaKnown RBP16.13■□□□□ 0.17
CCDC61-201ENST00000536603 FOXC2Q99958 501 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 TMEM38AQ9H6F2 299 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 CACYBPQ9HB71 228 aaKnown RBP16.13■□□□□ 0.17
CCDC61-201ENST00000536603 ZNF629Q9UEG4 869 aaPredicted RBP16.13■□□□□ 0.17
CCDC61-201ENST00000536603 EDARQ9UNE0 448 aa16.13■□□□□ 0.17
CCDC61-201ENST00000536603 ZNF443Q9Y2A4 671 aaPredicted RBP16.13■□□□□ 0.17
CCDC61-201ENST00000536603 DOCK7Q96N67 2140 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 DVL2O14641 736 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 TNFSF11O14788 317 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 ADAMDEC1O15204 470 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 TMIGD3P0DMS9 266 aaPredicted RBP16.12■□□□□ 0.17
CCDC61-201ENST00000536603 SLC6A2P23975 617 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 CTSSP25774 331 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 SHC1P29353 583 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 SLC6A8P48029 635 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 IDH2P48735 452 aaKnown RBP16.12■□□□□ 0.17
CCDC61-201ENST00000536603 EEF1A1P68104 462 aaKnown RBP16.12■□□□□ 0.17
CCDC61-201ENST00000536603 MERTKQ12866 999 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 FOXF2Q12947 444 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 SCARB2Q14108 478 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 LARS2Q15031 903 aaKnown RBP16.12■□□□□ 0.17
CCDC61-201ENST00000536603 PON3Q15166 354 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 ADRM1Q16186 407 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 CTU2Q2VPK5 515 aaKnown RBP16.12■□□□□ 0.17
CCDC61-201ENST00000536603 TMEM176BQ3YBM2 270 aaPredicted RBP16.12■□□□□ 0.17
CCDC61-201ENST00000536603 REEP3Q6NUK4 255 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 PPP4R4Q6NUP7 873 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 C8orf82Q6P1X6 216 aaPredicted RBP16.12■□□□□ 0.17
CCDC61-201ENST00000536603 POMZP3Q6PJE2 187 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 CLIP4Q8N3C7 705 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 OR2V1Q8NHB1 315 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 FNDC9Q8TBE3 224 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 NINJ1Q92982 152 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 LRRC58Q96CX6 371 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 ADGRG7Q96K78 797 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 KLHL15Q96M94 604 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 EFCAB1Q9HAE3 211 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 ACER3Q9NUN7 267 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 IFT52Q9Y366 437 aa16.12■□□□□ 0.17
CCDC61-201ENST00000536603 CDHR4A6H8M9 788 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 GJE1A6NN92 205 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 AP3D1O14617 1153 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 CXCL13O43927 109 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 THBS1P07996 1170 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 PABPC4LP0CB38 370 aaKnown RBP16.11■□□□□ 0.17
CCDC61-201ENST00000536603 GKN3PP0CG01 181 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 ETS2P15036 469 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 CPOXP36551 454 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 NUDT2P50583 147 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 BNIP1Q12981 228 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 SNTB1Q13884 538 aaKnown RBP16.11■□□□□ 0.17
CCDC61-201ENST00000536603 SLC25A35Q3KQZ1 300 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 ZNF311Q5JNZ3 666 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 PDSS1Q5T2R2 415 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 HBMQ6B0K9 141 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 NANOGP8Q6NSW7 305 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 RINLQ6ZS11 566 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 PLEKHM3Q6ZWE6 761 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 GCNT2Q8N0V5 402 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 OSTF1Q92882 214 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 ZFP3Q96NJ6 502 aa16.11■□□□□ 0.17
CCDC61-201ENST00000536603 GPATCH1Q9BRR8 931 aaKnown RBP16.11■□□□□ 0.17
CCDC61-201ENST00000536603 SPATA9Q9BWV2 254 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms