RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 PPP1R3BQ86XI6 285 aa20.78■□□□□ 0.92
HMGA2-206ENST00000536545 OMA1Q96E52 524 aa20.78■□□□□ 0.92
HMGA2-206ENST00000536545 TNFRSF13CQ96RJ3 184 aa20.78■□□□□ 0.92
HMGA2-206ENST00000536545 CHCHD6Q9BRQ6 235 aa20.78■□□□□ 0.92
HMGA2-206ENST00000536545 JAM3Q9BX67 310 aa20.78■□□□□ 0.92
HMGA2-206ENST00000536545 RTN4RQ9BZR6 473 aa20.78■□□□□ 0.92
HMGA2-206ENST00000536545 SLC19A3Q9BZV2 496 aa20.78■□□□□ 0.92
HMGA2-206ENST00000536545 SEMA4CQ9C0C4 833 aa20.78■□□□□ 0.92
HMGA2-206ENST00000536545 APMAPQ9HDC9 416 aa20.78■□□□□ 0.92
HMGA2-206ENST00000536545 NDUFB11Q9NX14 153 aa20.78■□□□□ 0.92
HMGA2-206ENST00000536545 IGHV3-20A0A0C4DH32 117 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 A0A1W2PQD3 144 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 FAM86C2PA6NEL3 165 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 VSTM2BA6NLU5 285 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 IGHA1P01876 353 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 HEXBP07686 556 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 LIMS3P0CW19 117 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 LIMS4P0CW20 117 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 ABCD3P28288 659 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 SLC6A6P31641 620 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 OPRL1P41146 370 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 DUSP3P51452 185 aaPredicted RBP20.77■□□□□ 0.92
HMGA2-206ENST00000536545 CCR4P51679 360 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 WNT4P56705 351 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 ZNF829Q3KNS6 432 aaPredicted RBP20.77■□□□□ 0.92
HMGA2-206ENST00000536545 SLC35F1Q5T1Q4 408 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 OVCH1Q7RTY7 1134 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 ADCK1Q86TW2 530 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 TMCO5AQ8N6Q1 288 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 NFAM1Q8NET5 270 aaPredicted RBP20.77■□□□□ 0.92
HMGA2-206ENST00000536545 DACH2Q96NX9 599 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 LAT2Q9GZY6 243 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 OCEL1Q9H607 264 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 OCIAD1Q9NX40 245 aa20.77■□□□□ 0.92
HMGA2-206ENST00000536545 SPEGQ15772 3267 aa20.77■□□□□ 0.91
HMGA2-206ENST00000536545 SAGE2PA6NJ88 616 aa20.77■□□□□ 0.91
HMGA2-206ENST00000536545 GTPBP1O00178 669 aaKnown RBP20.77■□□□□ 0.91
HMGA2-206ENST00000536545 ALOX12BO75342 701 aa20.77■□□□□ 0.91
HMGA2-206ENST00000536545 PPM1BO75688 479 aa20.77■□□□□ 0.91
HMGA2-206ENST00000536545 PPP1R3DO95685 299 aa20.77■□□□□ 0.91
HMGA2-206ENST00000536545 SYPP08247 313 aa20.77■□□□□ 0.91
HMGA2-206ENST00000536545 PSPHP78330 225 aa20.77■□□□□ 0.91
HMGA2-206ENST00000536545 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.77■□□□□ 0.91
HMGA2-206ENST00000536545 RTL4Q6ZR62 310 aa20.77■□□□□ 0.91
HMGA2-206ENST00000536545 OR4F15Q8NGB8 312 aa20.77■□□□□ 0.91
HMGA2-206ENST00000536545 BORCS5Q969J3 196 aa20.77■□□□□ 0.91
HMGA2-206ENST00000536545 MESP1Q9BRJ9 268 aa20.77■□□□□ 0.91
HMGA2-206ENST00000536545 GTPBP2Q9BX10 602 aaKnown RBP20.77■□□□□ 0.91
HMGA2-206ENST00000536545 RNF167Q9H6Y7 350 aa20.77■□□□□ 0.91
HMGA2-206ENST00000536545 MUC3AQ02505 3323 aa20.77■□□□□ 0.91
HMGA2-206ENST00000536545 VPS13AQ96RL7 3174 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 ALG1L2C9J202 215 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 GPX5O75715 221 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 IGF2P01344 180 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 PNMTP11086 282 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 FGF5P12034 268 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 SLC1A3P43003 542 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 SLC9A3P48764 834 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 ZNF117Q03924 483 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 ZNF362Q5T0B9 420 aaPredicted RBP20.76■□□□□ 0.91
HMGA2-206ENST00000536545 AMER2Q8N7J2 671 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 ZNF485Q8NCK3 441 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 APCDD1LQ8NCL9 501 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 KISS1RQ969F8 398 aaPredicted RBP20.76■□□□□ 0.91
HMGA2-206ENST00000536545 ZNF524Q96C55 264 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 SH3GL3Q99963 347 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 KLHDC3Q9BQ90 382 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 TMEM43Q9BTV4 400 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 HCAR1Q9BXC0 346 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 MED20Q9H944 212 aa20.76■□□□□ 0.91
HMGA2-206ENST00000536545 CHCHD3Q9NX63 227 aaKnown RBP20.76■□□□□ 0.91
HMGA2-206ENST00000536545 PPIEQ9UNP9 301 aaKnown RBP20.76■□□□□ 0.91
HMGA2-206ENST00000536545 A0A1B0GVG6 124 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 RIIAD1A6NNX1 92 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 J3QRE1 110 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 OR7A10O76100 309 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 PNLIPRP2P54317 469 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 OR2G6Q5TZ20 316 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 ARHGAP11AQ6P4F7 1023 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 PRR23CQ6ZRP0 262 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 CROCCP3Q8IVE0 287 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 SLC15A4Q8N697 577 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 SIRT6Q8N6T7 355 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 ZBTB44Q8NCP5 570 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 SH3YL1Q96HL8 342 aaPredicted RBP20.75■□□□□ 0.91
HMGA2-206ENST00000536545 ZNF649Q9BS31 505 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 ISYNA1Q9NPH2 558 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 AKIP1Q9NQ31 210 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 FBXO8Q9NRD0 319 aa20.75■□□□□ 0.91
HMGA2-206ENST00000536545 CCDC59Q9P031 241 aaKnown RBP20.75■□□□□ 0.91
HMGA2-206ENST00000536545 H2AFY2Q9P0M6 372 aaPredicted RBP20.75■□□□□ 0.91
HMGA2-206ENST00000536545 CCDC182A6NF36 153 aa20.74■□□□□ 0.91
HMGA2-206ENST00000536545 ELOA3DA6NLF2 546 aaPredicted RBP20.74■□□□□ 0.91
HMGA2-206ENST00000536545 PEPDP12955 493 aa20.74■□□□□ 0.91
HMGA2-206ENST00000536545 CPEP16870 476 aa20.74■□□□□ 0.91
HMGA2-206ENST00000536545 SLC6A8P48029 635 aa20.74■□□□□ 0.91
HMGA2-206ENST00000536545 RPS3AP61247 264 aaKnown RBP20.74■□□□□ 0.91
HMGA2-206ENST00000536545 RNF4P78317 190 aa20.74■□□□□ 0.91
HMGA2-206ENST00000536545 ELOA3BQ3SY89 546 aa20.74■□□□□ 0.91
HMGA2-206ENST00000536545 MEPCEQ7L2J0 689 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms