RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ZNF433Q8N7K0 673 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 OR7A2PQ8NGA2 310 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 OR5AK3PQ8NH89 298 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PIGXQ8TBF5 258 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 MZB1Q8WU39 189 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 HTRA1Q92743 480 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 OR7D2Q96RA2 312 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 QRSL1Q9H0R6 528 aaKnown RBP11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 FKRPQ9H9S5 495 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 TMEM160Q9NX00 188 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 TAS2R16Q9NYV7 291 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 KCNS2Q9ULS6 477 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 FKBP7Q9Y680 259 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ATP23Q9Y6H3 246 aa11.44□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ELOA3DA6NLF2 546 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 DUXAA6NLW8 204 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 E7EQL1 145 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 H7C417 338 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PIP5K1BO14986 540 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 MRPL33O75394 65 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 LYPLA1O75608 230 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PGM3O95394 542 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 UBTFL6P0CB48 400 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 LAMP1P11279 417 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 SRD5A1P18405 259 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 CD40P25942 277 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 GZMKP49863 264 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 SPOCK1Q08629 439 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ELOA3BQ3SY89 546 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ABLIM2Q6H8Q1 611 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 C11orf71Q6IPW1 123 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 KLHL24Q6TFL4 600 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 TMPPEQ6ZT21 453 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 EIF3MQ7L2H7 374 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 C16orf62Q7Z3J2 963 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 MTDHQ86UE4 582 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 C10orf107Q8IVU9 208 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 FNDC5Q8NAU1 212 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ELOA3Q8NG57 546 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 OR10H5Q8NGA6 315 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 OR5D16Q8NGK9 328 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 UBLCP1Q8WVY7 318 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 INPP5KQ9BT40 448 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 C1orf50Q9BV19 199 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 NMUR2Q9GZQ4 415 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 LAT2Q9GZY6 243 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PPCSQ9HAB8 311 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 EXD2Q9NVH0 621 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 UPB1Q9UBR1 384 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ING1Q9UK53 422 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 DNAJC15Q9Y5T4 150 aa11.43□□□□□ -0.58
TNFRSF1A-207ENST00000535958 GOLGA8QA0A0J9YX86 632 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 A0A1W2PR80 420 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 GOLGA8OA6NCC3 632 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 GOLGA8NF8WBI6 632 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ANKRD28O15084 1053 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 LMX1BO60663 402 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 TRIM13O60858 407 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PEX11AO75192 247 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 STX11O75558 287 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 KRT4P19013 534 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 USF1P22415 310 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 EDNRAP25101 427 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 APOBEC1P41238 236 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 MAGEA8P43361 318 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 SESN3P58005 492 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 HPCAP84074 193 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 SKP2Q13309 424 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PTGR1Q14914 329 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PDK3Q15120 406 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 FAM153CQ494X1 144 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ATAD3BQ5T9A4 648 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 FAM166AQ6J272 317 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 CASP12Q6UXS9 341 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 AGR3Q8TD06 166 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PROX1Q92786 737 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 SLC35G5Q96KT7 338 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PIMREGQ9BSJ6 248 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 GATA5Q9BWX5 397 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 BHLHE41Q9C0J9 482 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 TUBB1Q9H4B7 451 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 CHODLQ9H9P2 273 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 GPATCH2Q9NW75 528 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 CHRNA9Q9UGM1 479 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 TRAF6Q9Y4K3 522 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 SLC25A15Q9Y619 301 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 KCNE3Q9Y6H6 103 aa11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 NUP214P35658 2090 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PLCE1Q9P212 2302 aa11.41□□□□□ -0.58
TNFRSF1A-207ENST00000535958 IGKV3D-15A0A087WSY6 115 aa11.41□□□□□ -0.58
TNFRSF1A-207ENST00000535958 RNF103-CHMP3A0A140T963 221 aa11.41□□□□□ -0.58
TNFRSF1A-207ENST00000535958 TMEM233B4DJY2 109 aa11.41□□□□□ -0.58
TNFRSF1A-207ENST00000535958 NPIPB9F8W1W9 429 aa11.41□□□□□ -0.58
TNFRSF1A-207ENST00000535958 ETV2O00321 342 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PRPS1L1P21108 318 aa11.41□□□□□ -0.58
TNFRSF1A-207ENST00000535958 MATN1P21941 496 aa11.41□□□□□ -0.58
TNFRSF1A-207ENST00000535958 FKBP2P26885 142 aaKnown RBP11.41□□□□□ -0.58
TNFRSF1A-207ENST00000535958 PDLIM4P50479 330 aa11.41□□□□□ -0.58
TNFRSF1A-207ENST00000535958 EFNA4P52798 201 aa11.41□□□□□ -0.58
TNFRSF1A-207ENST00000535958 RPS26P62854 115 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms