RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 ADGRG3Q86Y34 549 aa14.09□□□□□ -0.15
CNN1-202ENST00000535659 ZDHHC21Q8IVQ6 265 aa14.09□□□□□ -0.15
CNN1-202ENST00000535659 C3orf49Q96BT1 292 aa14.09□□□□□ -0.15
CNN1-202ENST00000535659 GPR137Q96N19 417 aa14.09□□□□□ -0.15
CNN1-202ENST00000535659 SFXN2Q96NB2 322 aa14.09□□□□□ -0.15
CNN1-202ENST00000535659 CHID1Q9BWS9 393 aa14.09□□□□□ -0.15
CNN1-202ENST00000535659 SLC6A15Q9H2J7 730 aa14.09□□□□□ -0.15
CNN1-202ENST00000535659 EXO5Q9H790 373 aa14.09□□□□□ -0.15
CNN1-202ENST00000535659 SERINC1Q9NRX5 453 aa14.09□□□□□ -0.15
CNN1-202ENST00000535659 PLSCR2Q9NRY7 297 aa14.09□□□□□ -0.15
CNN1-202ENST00000535659 RIMS3Q9UJD0 308 aa14.09□□□□□ -0.15
CNN1-202ENST00000535659 OSGIN1Q9UJX0 560 aa14.09□□□□□ -0.15
CNN1-202ENST00000535659 A4GNTQ9UNA3 340 aa14.09□□□□□ -0.15
CNN1-202ENST00000535659 SLC6A5Q9Y345 797 aa14.09□□□□□ -0.15
CNN1-202ENST00000535659 A0A0B4J2E0 115 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 A0A1B0GX12 115 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 TRAPPC13A5PLN9 417 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 J3KTA2 159 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 FFAR1O14842 300 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 OR5F1O95221 314 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 RHCEP18577 417 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 CXCR1P25024 350 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 IFNA8P32881 189 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 GCKP35557 465 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 MLLT10P55197 1068 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 CDH12P55289 794 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 TAS2R41P59536 307 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 ALG10BQ5I7T1 473 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 PAPD5Q8NDF8 572 aaKnown RBP14.08□□□□□ -0.16
CNN1-202ENST00000535659 SLC38A4Q969I6 547 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 SLCO4A1Q96BD0 722 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 DUS3LQ96G46 650 aaKnown RBP14.08□□□□□ -0.16
CNN1-202ENST00000535659 ZNF347Q96SE7 839 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 C12orf10Q9HB07 376 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 SELENONQ9NZV5 590 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 LIPGQ9Y5X9 500 aa14.08□□□□□ -0.16
CNN1-202ENST00000535659 SETXQ7Z333 2677 aaKnown RBP14.08□□□□□ -0.16
CNN1-202ENST00000535659 TMED7-TICAM2A0A0A6YYA0 188 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 NCKAP5O14513 1909 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 ACTL6AO96019 429 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 THY1P04216 161 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 THRBP10828 461 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 PNMTP11086 282 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 BMP7P18075 431 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 SLC7A1P30825 629 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 MAGEA2P43356 314 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 MAP2K6P52564 334 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 ST3GAL3Q11203 375 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 NHSL2Q5HYW2 709 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 SWT1Q5T5J6 900 aaKnown RBP14.07□□□□□ -0.16
CNN1-202ENST00000535659 VASNQ6EMK4 673 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 POMZP3Q6PJE2 187 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 GDF7Q7Z4P5 450 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 ATG4DQ86TL0 474 aaPredicted RBP14.07□□□□□ -0.16
CNN1-202ENST00000535659 RNF217Q8TC41 542 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 CPT1CQ8TCG5 803 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 ABTB1Q969K4 478 aaPredicted RBP14.07□□□□□ -0.16
CNN1-202ENST00000535659 SLC41A3Q96GZ6 507 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 PRRC1Q96M27 445 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 PIP5K1AQ99755 562 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 SLX1AQ9BQ83 275 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 FNDC11Q9BVV2 318 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 YY1AP1Q9H869 796 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 RHCGQ9UBD6 479 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 STOML1Q9UBI4 398 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 ACAD8Q9UKU7 415 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 TMED7Q9Y3B3 224 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 SPTA1P02549 2419 aa14.07□□□□□ -0.16
CNN1-202ENST00000535659 EIF4E1BA6NMX2 242 aaKnown RBP14.06□□□□□ -0.16
CNN1-202ENST00000535659 AQP7O14520 342 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 DIRAS1O95057 198 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 PRSS23O95084 383 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 LYPD3O95274 346 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 MT-ND1P03886 318 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 CCNA2P20248 432 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 IL11P20809 199 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 FKBP2P26885 142 aaKnown RBP14.06□□□□□ -0.16
CNN1-202ENST00000535659 ELK4P28324 431 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 STARP49675 285 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 TDGF1P3P51864 188 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 RAC1P63000 192 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.06□□□□□ -0.16
CNN1-202ENST00000535659 ARHGAP11AQ6P4F7 1023 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 LILRA2Q8N149 483 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 GHDCQ8N2G8 530 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 NMNAT1Q9HAN9 279 aaPredicted RBP14.06□□□□□ -0.16
CNN1-202ENST00000535659 SLC7A7Q9UM01 511 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 AP4S1Q9Y587 144 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 AP4B1Q9Y6B7 739 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 KALRNO60229 2985 aa14.06□□□□□ -0.16
CNN1-202ENST00000535659 A0A087WUJ7 227 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 A0A1B0GTH9 108 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 ELOA3DA6NLF2 546 aaPredicted RBP14.05□□□□□ -0.16
CNN1-202ENST00000535659 H3BML4 177 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 CHP2O43745 196 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 FKBP6O75344 327 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 ENTPD5O75356 428 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 PEPDP12955 493 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 SELENBP1Q13228 472 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 BCL2A1Q16548 175 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms