RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 TCRBV16S1A1N1A0A5B0 115 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 ZNF593O00488 134 aaPredicted RBP12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 ARPC1BO15143 372 aaKnown RBP12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 LAMP2P13473 410 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 SQSTM1Q13501 440 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 HBMQ6B0K9 141 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 ALKAL2Q6UX46 152 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 VN1R4Q7Z5H5 301 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 MRPL43Q8N983 215 aaKnown RBP12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 RASD2Q96D21 266 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 NMNAT3Q96T66 252 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 MED18Q9BUE0 208 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 RPP25Q9BUL9 199 aaKnown RBP12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 SPATA5L1Q9BVQ7 753 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 PAK6Q9NQU5 681 aaPredicted RBP12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 COPS3Q9UNS2 423 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 MUC3AQ02505 3323 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 LIPCP11150 499 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 RAB3BP20337 219 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 SHC2P98077 582 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 PLAURQ03405 335 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 NDUFA9Q16795 377 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 FCRLAQ7L513 359 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 PLCZ1Q86YW0 608 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 ZNF511Q8NB15 262 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 LCN9Q8WX39 176 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 LMF1Q96S06 567 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 ARHGDIGQ99819 225 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 GHITMQ9H3K2 345 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 ING4Q9UNL4 249 aa12.85□□□□□ -0.35
LPCAT3-203ENST00000535479 TBC1D3DA0A087WVF3 549 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 TBC1D3IA0A087WXS9 549 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 TBC1D3EA0A087X179 549 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 TBC1D3KA0A087X1G2 549 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 TBC1D3FA6NER0 549 aaPredicted RBP12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 PRR32B1ATL7 298 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 TBC1D3LB9A6J9 549 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 H0YC42 278 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 FMO6PO60774 539 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 DHFRP00374 187 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 TBC1D3HP0C7X1 549 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 HIST1H1CP16403 213 aaKnown RBP12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 FPR3P25089 353 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 DCTDP32321 178 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 IFNGR2P38484 337 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 ANXA11P50995 505 aaKnown RBP12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 SNTB2Q13425 540 aaKnown RBP12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 DEFB115Q30KQ5 88 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 TBC1D3GQ6DHY5 549 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 TBC1D3CQ6IPX1 549 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 KIAA1324Q6UXG2 1013 aaKnown RBP12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 OAFQ86UD1 273 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 TBC1D3Q8IZP1 549 aaPredicted RBP12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 COX18Q8N8Q8 333 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 OR2L5Q8NG80 312 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 OR52I2Q8NH67 350 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 COQ8AQ8NI60 647 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 HS6ST2Q96MM7 605 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 ZNF681Q96N22 645 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 SDF2Q99470 211 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 C19orf43Q9BQ61 176 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 KLHDC3Q9BQ90 382 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 FAM83CQ9BQN1 747 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 NDC1Q9BTX1 674 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 ACTRT3Q9BYD9 372 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 PELI2Q9HAT8 420 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 TRIM36Q9NQ86 728 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 ZNF69Q9UC07 566 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 GPR34Q9UPC5 381 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 GPR171O14626 319 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 FGF17O60258 216 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 LINC00271P0C7V0 271 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 EDNRAP25101 427 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 RPL4P36578 427 aaKnown RBP12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 GDNFP39905 211 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 KIAA1024LP59773 190 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 TSPAN5P62079 268 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 CMTM4Q8IZR5 234 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 CXorf58Q96LI9 332 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 ASB6Q9NWX5 421 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 GTF2A1LQ9UNN4 478 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 IER3IP1Q9Y5U9 82 aa12.84□□□□□ -0.35
LPCAT3-203ENST00000535479 TVP23AA6NH52 213 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 VEGFDO43915 354 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 IGHA1P01876 353 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 PDGFAP04085 211 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 H2AFB2P0C5Z0 115 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 NOGQ13253 232 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 ESCO2Q56NI9 601 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 GARNL3Q5VVW2 1013 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 CD300LDQ6UXZ3 194 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 PARGQ86W56 976 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 FAM219AQ8IW50 185 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 HYLS1Q96M11 299 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 OR1F2PQ96R84 312 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 KXD1Q9BQD3 176 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 GTPBP2Q9BX10 602 aaKnown RBP12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 DPAGT1Q9H3H5 408 aa12.83□□□□□ -0.36
LPCAT3-203ENST00000535479 HEXA-AS1Q9H8Q6 139 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms