RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 LYPD3O95274 346 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 FREM3P0C091 2139 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 FUT4P22083 530 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 TCEA1P23193 301 aaKnown RBP12.96□□□□□ -0.33
COL16A1-217ENST00000532877 FASP25445 335 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 GDF1P27539 372 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 SRD5A2P31213 254 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 CDH12P55289 794 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 DLX5P56178 289 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 SESN3P58005 492 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 HYAL4Q2M3T9 481 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 NADK2Q4G0N4 442 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 ALG10BQ5I7T1 473 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 HMBOX1Q6NT76 420 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 PRICKLE2Q7Z3G6 844 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 GRINAQ7Z429 371 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 GDF7Q7Z4P5 450 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 LSRQ86X29 649 aaPredicted RBP12.96□□□□□ -0.33
COL16A1-217ENST00000532877 LILRA2Q8N149 483 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 TMEM251Q8N6I4 163 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 PIK3C3Q8NEB9 887 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 DNAJA4Q8WW22 397 aaPredicted RBP12.96□□□□□ -0.33
COL16A1-217ENST00000532877 TMEM234Q8WY98 164 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 ZBTB8AQ96BR9 441 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 DTNBP1Q96EV8 351 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 NPAS1Q99742 590 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 PKP2Q99959 881 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 FNDC11Q9BVV2 318 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 OR2B2Q9GZK3 357 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 NMNAT1Q9HAN9 279 aaPredicted RBP12.96□□□□□ -0.33
COL16A1-217ENST00000532877 ACER3Q9NUN7 267 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 VNN3Q9NY84 501 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 DNAJB9Q9UBS3 223 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 RIMS3Q9UJD0 308 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 PRDM4Q9UKN5 801 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 SLC7A7Q9UM01 511 aa12.96□□□□□ -0.33
COL16A1-217ENST00000532877 ICE1Q9Y2F5 2266 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 A0A1W2PRQ8 180 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 SHISA8B8ZZ34 492 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 ACOT7O00154 380 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 CHP2O43745 196 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 ZIC3O60481 467 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 RASAL1O95294 804 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 NTN1O95631 604 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 LDLRP01130 860 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 H1F0P07305 194 aaKnown RBP12.95□□□□□ -0.34
COL16A1-217ENST00000532877 THRBP10828 461 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 ZNF24P17028 368 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 HK1P19367 917 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 TACR3P29371 465 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 IFNA8P32881 189 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 MAGEA5P43359 124 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 PPIAP62937 165 aaKnown RBP12.95□□□□□ -0.34
COL16A1-217ENST00000532877 ST3GAL3Q11203 375 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 MERTKQ12866 999 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 NFATC3Q12968 1075 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 DGCR6Q14129 220 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 TOMM20Q15388 145 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 INAQ16352 499 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 PLEKHN1Q494U1 663 aaPredicted RBP12.95□□□□□ -0.34
COL16A1-217ENST00000532877 SLC25A53Q5H9E4 307 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 RNFT1Q5M7Z0 435 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 SWT1Q5T5J6 900 aaKnown RBP12.95□□□□□ -0.34
COL16A1-217ENST00000532877 ULK3Q6PHR2 472 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 WDR88Q6ZMY6 472 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 ATG4DQ86TL0 474 aaPredicted RBP12.95□□□□□ -0.34
COL16A1-217ENST00000532877 SLC22A16Q86VW1 577 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 PQLC1Q8N2U9 271 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 FAM83FQ8NEG4 500 aaPredicted RBP12.95□□□□□ -0.34
COL16A1-217ENST00000532877 OR52J3Q8NH60 311 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 POC1BQ8TC44 478 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 PNPLA2Q96AD5 504 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 MRGPRX4Q96LA9 322 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 ADAM19Q9H013 955 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 DCLRE1BQ9H816 532 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 REEP1Q9H902 201 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 SELENONQ9NZV5 590 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 LUZP4Q9P127 313 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 LYVE1Q9Y5Y7 322 aa12.95□□□□□ -0.34
COL16A1-217ENST00000532877 MED12Q93074 2177 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 MPDZO75970 2070 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 TRBV4-1A0A0J9YWV2 114 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 C7orf72A4D263 438 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 GNGT2O14610 69 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 GADD45GO95257 159 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 BAG2O95816 211 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 HPNP05981 417 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 CELA3AP09093 270 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 ANPEPP15144 967 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 ZNF17P17021 662 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 EIF1P41567 113 aaKnown RBP12.94□□□□□ -0.34
COL16A1-217ENST00000532877 HTR3AP46098 478 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 LIMS1P48059 325 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 POLR2HP52434 150 aaKnown RBP12.94□□□□□ -0.34
COL16A1-217ENST00000532877 IST1P53990 364 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 FOXK1P85037 733 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 FOXD4Q12950 439 aaPredicted RBP12.94□□□□□ -0.34
COL16A1-217ENST00000532877 RIPK1Q13546 671 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 TRAM2Q15035 370 aa12.94□□□□□ -0.34
COL16A1-217ENST00000532877 TMEM44Q2T9K0 475 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms