RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 A0A1W2PNR3 127 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 A0A1W2PP18 115 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 BMP2P12643 396 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 FKBP2P26885 142 aaKnown RBP20.53■□□□□ 0.88
CAPN1-222ENST00000532285 IDH2P48735 452 aaKnown RBP20.53■□□□□ 0.88
CAPN1-222ENST00000532285 FAM27E3Q08E93 113 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 LIN52Q52LA3 116 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 HSP90B2PQ58FF3 399 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 METTL21CQ5VZV1 264 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 FCRLAQ7L513 359 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 MSRB3Q8IXL7 192 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 ZNF440Q8IYI8 595 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 TMEM19Q96HH6 336 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 OR5B2Q96R09 309 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 CACYBPQ9HB71 228 aaKnown RBP20.53■□□□□ 0.88
CAPN1-222ENST00000532285 A4GALTQ9NPC4 353 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 CTPS2Q9NRF8 586 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 SLAMF8Q9P0V8 285 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 PRDM4Q9UKN5 801 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 ZNF232Q9UNY5 417 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 GMEB1Q9Y692 573 aa20.53■□□□□ 0.88
CAPN1-222ENST00000532285 SH3D21A4FU49 640 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 ENO4A6NNW6 628 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 FAAHO00519 579 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 ADAM11O75078 769 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 PRKD3O94806 890 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 POU2F1P14859 743 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 UQCRBP14927 111 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 HTR3AP46098 478 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 KCNJ5P48544 419 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 LARS2Q15031 903 aaKnown RBP20.52■□□□□ 0.88
CAPN1-222ENST00000532285 ZSWIM7Q19AV6 140 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 PRAMEF8Q5VWM4 474 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 PRAMEF7Q5VXH5 474 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 VRK2Q86Y07 508 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 SLC43A2Q8N370 569 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 GPATCH1Q9BRR8 931 aaKnown RBP20.52■□□□□ 0.88
CAPN1-222ENST00000532285 POLDIP3Q9BY77 421 aaKnown RBP20.52■□□□□ 0.88
CAPN1-222ENST00000532285 ZNF385DQ9H6B1 395 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 GP6Q9HCN6 339 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 RASSF1Q9NS23 344 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 VAPAQ9P0L0 249 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 CHRNA9Q9UGM1 479 aa20.52■□□□□ 0.88
CAPN1-222ENST00000532285 HRNRQ86YZ3 2850 aaPredicted RBP20.52■□□□□ 0.87
CAPN1-222ENST00000532285 CDHR4A6H8M9 788 aa20.51■□□□□ 0.87
CAPN1-222ENST00000532285 CFAP73A6NFT4 308 aa20.51■□□□□ 0.87
CAPN1-222ENST00000532285 AP3D1O14617 1153 aa20.51■□□□□ 0.87
CAPN1-222ENST00000532285 GOSR1O95249 250 aa20.51■□□□□ 0.87
CAPN1-222ENST00000532285 THBS1P07996 1170 aa20.51■□□□□ 0.87
CAPN1-222ENST00000532285 AGTR1P30556 359 aa20.51■□□□□ 0.87
CAPN1-222ENST00000532285 SYT14P1Q58G82 188 aa20.51■□□□□ 0.87
CAPN1-222ENST00000532285 RPS26P11Q5JNZ5 115 aaPredicted RBP20.51■□□□□ 0.87
CAPN1-222ENST00000532285 CDH24Q86UP0 819 aa20.51■□□□□ 0.87
CAPN1-222ENST00000532285 ABHD3Q8WU67 409 aa20.51■□□□□ 0.87
CAPN1-222ENST00000532285 ARMC7Q9H6L4 198 aa20.51■□□□□ 0.87
CAPN1-222ENST00000532285 BCL2L10Q9HD36 194 aa20.51■□□□□ 0.87
CAPN1-222ENST00000532285 CORO2BQ9UQ03 480 aa20.51■□□□□ 0.87
CAPN1-222ENST00000532285 ZNF443Q9Y2A4 671 aaPredicted RBP20.51■□□□□ 0.87
CAPN1-222ENST00000532285 IFT52Q9Y366 437 aa20.51■□□□□ 0.87
CAPN1-222ENST00000532285 OTOGQ6ZRI0 2925 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 TRBV5-3A0A0A0MS03 114 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 NUDT7P0C024 238 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 TROVE2P10155 538 aaKnown RBP eCLIP20.5■□□□□ 0.87
CAPN1-222ENST00000532285 CD1EP15812 388 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 SLC1A3P43003 542 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 CLK1P49759 484 aaKnown RBP20.5■□□□□ 0.87
CAPN1-222ENST00000532285 CSNK2A1P68400 391 aaPredicted RBP20.5■□□□□ 0.87
CAPN1-222ENST00000532285 EPS8Q12929 822 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 TMEM201Q5SNT2 666 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 RNF220Q5VTB9 566 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 ZNF836Q6ZNA1 936 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 TMPPEQ6ZT21 453 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 ADGRG3Q86Y34 549 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 BBS10Q8TAM1 723 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 TSPEARQ8WU66 669 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 MAL2Q969L2 176 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 TACO1Q9BSH4 297 aaKnown RBP20.5■□□□□ 0.87
CAPN1-222ENST00000532285 CLEC4MQ9H2X3 399 aaPredicted RBP20.5■□□□□ 0.87
CAPN1-222ENST00000532285 MED4Q9NPJ6 270 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 RLIMQ9NVW2 624 aa20.5■□□□□ 0.87
CAPN1-222ENST00000532285 LEF1Q9UJU2 399 aaPredicted RBP20.5■□□□□ 0.87
CAPN1-222ENST00000532285 EVPLLA8MZ36 301 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 C5orf58C9J3I9 102 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 C16orf97H3BN30 126 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 SULT2B1O00204 365 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 CASKO14936 926 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 TFPIP10646 304 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 ENPP1P22413 925 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 UGT2B10P36537 528 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 DIO1P49895 249 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 POLR2HP52434 150 aaKnown RBP20.49■□□□□ 0.87
CAPN1-222ENST00000532285 DLEU7Q6UYE1 221 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 STK32CQ86UX6 486 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 SPATA9Q9BWV2 254 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 TMEM120AQ9BXJ8 343 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 FANCFQ9NPI8 374 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 KLHL9Q9P2J3 617 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 KLHL13Q9P2N7 655 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.49■□□□□ 0.87
CAPN1-222ENST00000532285 NDUFAF1Q9Y375 327 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms