RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ZCCHC3Q9NUD5 404 aaKnown RBP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 INTS9Q9NV88 658 aaKnown RBP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 TUBA8Q9NY65 449 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 KLRF1Q9NZS2 232 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 ACTR3BQ9P1U1 418 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 EXTL2Q9UBQ6 330 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 DNAJB9Q9UBS3 223 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 MRTO4Q9UKD2 239 aaKnown RBP5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 PRDM4Q9UKN5 801 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 USP22Q9UPT9 525 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 U3KQE9 123 aa5.27□□□□□ -1.57
HMGB1P42-201ENST00000532126 SCN2AQ99250 2005 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 LOC100509620A0A075B734 347 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 LRRC3CA6NJW4 275 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 NUDT19A8MXV4 375 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 CCL21O00585 134 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 SDHDO14521 159 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 PRRG2O14669 202 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 DHHO43323 396 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 DIAPH2O60879 1101 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 UGT2B11O75310 529 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 TRIM3O75382 744 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 C6orf47O95873 294 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 F13BP05160 661 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 RFPL3SP0C7P2 107 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 RAP2AP10114 183 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 ELAVL4P26378 380 aaKnown RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 COL8A1P27658 744 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 GABRA3P34903 492 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 PTGS2P35354 604 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 MAGEA5P43359 124 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 SLC15A1P46059 708 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 RFX3P48380 749 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 CCT3P49368 545 aaKnown RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 PNLIPRP2P54317 469 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 PSMD4P55036 377 aaKnown RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 NME5P56597 212 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 UFM1P61960 85 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 IL13RA1P78552 427 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 CD83Q01151 205 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 CHRNEQ04844 493 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 SNTA1Q13424 505 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 GAB1Q13480 694 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 SNTB1Q13884 538 aaKnown RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 SLC10A1Q14973 349 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 DECR1Q16698 335 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 LCE2CQ5TA81 110 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 ANXA8L1Q5VT79 327 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR4F3Q6IEY1 312 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 MFSD12Q6NUT3 480 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 CDC73Q6P1J9 531 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 ZCCHC12Q6PEW1 402 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 BHLHB9Q6PI77 547 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 TEPPQ6URK8 271 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 CAMKMTQ7Z624 323 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 CDRT4Q8N9R6 151 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR4N2Q8NGD1 307 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 MBD3L2Q8NHZ7 208 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 GPR151Q8TDV0 419 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 ACTRT2Q8TDY3 377 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 DUSP19Q8WTR2 217 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 SSC4DQ8WTU2 575 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 SLC9A6Q92581 669 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 TESCQ96BS2 214 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 EFHD2Q96C19 240 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 INTS12Q96CB8 462 aaKnown RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 NODALQ96S42 347 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 ZBTB18Q99592 522 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 NAA11Q9BSU3 229 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 LMF2Q9BU23 707 aaKnown RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 OSBPL11Q9BXB4 747 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 EXO5Q9H790 373 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 ZNF703Q9H7S9 590 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 ZDHHC11Q9H8X9 412 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 PROK2Q9HC23 129 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 SLCO1B3Q9NPD5 702 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 PCDHB16Q9NRJ7 776 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 AIG1Q9NVV5 245 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 ZNF446Q9NWS9 450 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 NTMQ9P121 344 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 IL19Q9UHD0 177 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 ERRFI1Q9UJM3 462 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 LEF1Q9UJU2 399 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 FAF1Q9UNN5 650 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 ZNF835Q9Y2P0 537 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 USH1CQ9Y6N9 552 aa5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 FASNP49327 2511 aaKnown RBP5.26□□□□□ -1.57
HMGB1P42-201ENST00000532126 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 UQCRHLA0A096LP55 91 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 TRGV5A0A0B4J1U4 118 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 PRSS51A0A1B0GVH4 220 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 OR14I1A6ND48 311 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 MBD3L5A6NJ08 208 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 TEX22C9J3V5 150 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 E9PBE3 544 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 NPIPA2E9PIF3 369 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 NPIPA3F8WFD2 350 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 RNASET2O00584 256 aaKnown RBP5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 ZNF195O14628 629 aa5.25□□□□□ -1.57
HMGB1P42-201ENST00000532126 ANKRD28O15084 1053 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms