RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ARAFP10398 606 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 DDX5P17844 614 aaKnown RBP7.88□□□□□ -1.15
VPS11-203ENST00000529545 EDNRAP25101 427 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 DIO1P49895 249 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 CHN2P52757 468 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 PRKAA2P54646 552 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 TGFBR3Q03167 851 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 SCGB2A2Q13296 93 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 CBFBQ13951 182 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 PDK3Q15120 406 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 QPRTQ15274 297 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 TOMM34Q15785 309 aaPredicted RBP7.88□□□□□ -1.15
VPS11-203ENST00000529545 GABRA6Q16445 453 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 TIGD2Q4W5G0 525 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 KLHL26Q53HC5 615 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 SLC25A53Q5H9E4 307 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 C1QTNF12Q5T7M4 302 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 ANKRD26P1Q6NSI1 321 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 KLHL24Q6TFL4 600 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 UGT2A3Q6UWM9 527 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 TMPPEQ6ZT21 453 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 MTDHQ86UE4 582 aaKnown RBP7.88□□□□□ -1.15
VPS11-203ENST00000529545 LCA5Q86VQ0 697 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 CCNYL1Q8N7R7 359 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 C3orf56Q8N813 242 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 ZFAND2BQ8WV99 257 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 TMEM234Q8WY98 164 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 ZNF75CPQ92670 426 aaPredicted RBP7.88□□□□□ -1.15
VPS11-203ENST00000529545 CDS1Q92903 461 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 CIDECQ96AQ7 238 aaPredicted RBP7.88□□□□□ -1.15
VPS11-203ENST00000529545 L3HYPDHQ96EM0 354 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 OTUB1Q96FW1 271 aaPredicted RBP7.88□□□□□ -1.15
VPS11-203ENST00000529545 ZNF764Q96H86 408 aaPredicted RBP7.88□□□□□ -1.15
VPS11-203ENST00000529545 METTL2AQ96IZ6 378 aaKnown RBP7.88□□□□□ -1.15
VPS11-203ENST00000529545 MUS81Q96NY9 551 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 SORCS2Q96PQ0 1159 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 KCNS3Q9BQ31 491 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 BHLHE41Q9C0J9 482 aaPredicted RBP7.88□□□□□ -1.15
VPS11-203ENST00000529545 REEP4Q9H6H4 257 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 DUSP22Q9NRW4 184 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 ACSS1Q9NUB1 689 aaPredicted RBP7.88□□□□□ -1.15
VPS11-203ENST00000529545 ZCCHC3Q9NUD5 404 aaKnown RBP7.88□□□□□ -1.15
VPS11-203ENST00000529545 UPB1Q9UBR1 384 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 ZNF180Q9UJW8 692 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 FBXO9Q9UK97 447 aaPredicted RBP7.88□□□□□ -1.15
VPS11-203ENST00000529545 AMDHD2Q9Y303 409 aa7.88□□□□□ -1.15
VPS11-203ENST00000529545 DYSFO75923 2080 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 IGKV3D-15A0A087WSY6 115 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 NPIPA5A0A0B4J1W7 369 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 NPIPA7E9PJI5 369 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 ATP6V1G2-DDX39BF2Z307 99 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 ZNF264O43296 627 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 AKAP10O43572 662 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 EIF4E2O60573 245 aaKnown RBP7.87□□□□□ -1.15
VPS11-203ENST00000529545 WNT11O96014 354 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 ERCC1P07992 297 aaPredicted RBP7.87□□□□□ -1.15
VPS11-203ENST00000529545 NPIPA8P0DM63 369 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 TFPIP10646 304 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 UBL4AP11441 157 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 SERPINF1P36955 418 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 ATP12AP54707 1039 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 PRPS1P60891 318 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 NAA20P61599 178 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 ACTG1P63261 375 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 MERTKQ12866 999 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 LASP1Q14847 261 aaKnown RBP7.87□□□□□ -1.15
VPS11-203ENST00000529545 SWI5Q1ZZU3 235 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 CDC73Q6P1J9 531 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 C17orf78Q8N4C9 275 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 LINC01356Q8N9X3 169 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 PIGXQ8TBF5 258 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 ADAMTS15Q8TE58 950 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 SLC25A43Q8WUT9 341 aaPredicted RBP7.87□□□□□ -1.15
VPS11-203ENST00000529545 DCAKDQ8WVC6 231 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 ST8SIA1Q92185 356 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 CCDC126Q96EE4 140 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 EGLN2Q96KS0 407 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 FUT8Q9BYC5 575 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 BPESC1Q9GZL8 116 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 RAB1BQ9H0U4 201 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 TSPYL1Q9H0U9 437 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 PIGUQ9H490 435 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 PARPBPQ9NWS1 579 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 TMEM216Q9P0N5 145 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 MALT1Q9UDY8 824 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 FAF1Q9UNN5 650 aaPredicted RBP7.87□□□□□ -1.15
VPS11-203ENST00000529545 DTNAQ9Y4J8 743 aa7.87□□□□□ -1.15
VPS11-203ENST00000529545 SPIN1Q9Y657 262 aaPredicted RBP7.87□□□□□ -1.15
VPS11-203ENST00000529545 VSTM5A8MXK1 200 aa7.86□□□□□ -1.15
VPS11-203ENST00000529545 B9A039 149 aa7.86□□□□□ -1.15
VPS11-203ENST00000529545 SLC28A1O00337 649 aa7.86□□□□□ -1.15
VPS11-203ENST00000529545 TBX19O60806 448 aa7.86□□□□□ -1.15
VPS11-203ENST00000529545 CYP7B1O75881 506 aa7.86□□□□□ -1.15
VPS11-203ENST00000529545 H6PDO95479 791 aa7.86□□□□□ -1.15
VPS11-203ENST00000529545 HMGN2P05204 90 aaKnown RBP7.86□□□□□ -1.15
VPS11-203ENST00000529545 PGCP20142 388 aa7.86□□□□□ -1.15
VPS11-203ENST00000529545 APEX1P27695 318 aaKnown RBP7.86□□□□□ -1.15
VPS11-203ENST00000529545 MAGEA8P43361 318 aa7.86□□□□□ -1.15
VPS11-203ENST00000529545 FOXA1P55317 472 aa7.86□□□□□ -1.15
VPS11-203ENST00000529545 NDUFAF6Q330K2 333 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms