RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 ANKZF1Q9H8Y5 726 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 GPATCH2Q9NW75 528 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 TRAF6Q9Y4K3 522 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 PMF1-BGLAPU3KQ54 211 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 NPIPB9F8W1W9 429 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 MRPL33O75394 65 aaKnown RBP13.89□□□□□ -0.19
CTTN-212ENST00000527962 STX11O75558 287 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 CSTAP01040 98 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 TFPIP10646 304 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 KRT4P19013 534 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 PRPS1L1P21108 318 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 CD40P25942 277 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 APOBEC1P41238 236 aaKnown RBP13.89□□□□□ -0.19
CTTN-212ENST00000527962 IRX1P78414 480 aaPredicted RBP13.89□□□□□ -0.19
CTTN-212ENST00000527962 NDUFAF6Q330K2 333 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 SYT14P1Q58G82 188 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 PDZK1Q5T2W1 519 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 C1QTNF12Q5T7M4 302 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 EIF3MQ7L2H7 374 aaKnown RBP13.89□□□□□ -0.19
CTTN-212ENST00000527962 OR52N5Q8NH56 324 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 PIGXQ8TBF5 258 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 PROX1Q92786 737 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 OR7D2Q96RA2 312 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 SDF2Q99470 211 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 INPP5KQ9BT40 448 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 GATA5Q9BWX5 397 aaPredicted RBP13.89□□□□□ -0.19
CTTN-212ENST00000527962 FKRPQ9H9S5 495 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 EXD2Q9NVH0 621 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 TAS2R16Q9NYV7 291 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 PRR14LQ5THK1 2151 aa13.89□□□□□ -0.19
CTTN-212ENST00000527962 IGKV3D-15A0A087WSY6 115 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 E7EQL1 145 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 H7C417 338 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 PIP5K1BO14986 540 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 DNPH1O43598 174 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 PEX11AO75192 247 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 C6orf47O95873 294 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 AGR2O95994 175 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 PTNP21246 168 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 THBS2P35442 1172 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 SOAT1P35610 550 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 CLK1P49759 484 aaKnown RBP13.88□□□□□ -0.19
CTTN-212ENST00000527962 ZNF83P51522 516 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 SESN3P58005 492 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 TGFBR3Q03167 851 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 GPR68Q15743 365 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 ZNF563Q8TA94 476 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 OIT3Q8WWZ8 545 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 ZNF75CPQ92670 426 aaPredicted RBP13.88□□□□□ -0.19
CTTN-212ENST00000527962 COQ8BQ96D53 544 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 BHLHE41Q9C0J9 482 aaPredicted RBP13.88□□□□□ -0.19
CTTN-212ENST00000527962 ACER3Q9NUN7 267 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 PARPBPQ9NWS1 579 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 NPAP1Q9NZP6 1156 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 PCDHGB4Q9UN71 923 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 KCNE3Q9Y6H6 103 aa13.88□□□□□ -0.19
CTTN-212ENST00000527962 M0R1B8 84 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 NPHS1O60500 1241 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 DNAJA2O60884 412 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 H6PDO95479 791 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 UBTFL6P0CB48 400 aaPredicted RBP13.87□□□□□ -0.19
CTTN-212ENST00000527962 MATN1P21941 496 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 USF1P22415 310 aaPredicted RBP13.87□□□□□ -0.19
CTTN-212ENST00000527962 MAGEA8P43361 318 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 EFNA4P52798 201 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 MAD2L1Q13257 205 aaPredicted RBP13.87□□□□□ -0.19
CTTN-212ENST00000527962 SKP2Q13309 424 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 PTGR1Q14914 329 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 ZNF141Q15928 474 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 ATAD3BQ5T9A4 648 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 ABLIM2Q6H8Q1 611 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 C11orf71Q6IPW1 123 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 C16orf62Q7Z3J2 963 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 FNDC5Q8NAU1 212 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 DUSP26Q9BV47 211 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 TXLNGYQ9BZA5 131 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 QRSL1Q9H0R6 528 aaKnown RBP13.87□□□□□ -0.19
CTTN-212ENST00000527962 SLC35A3Q9Y2D2 325 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 HDGFL3Q9Y3E1 203 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 SLC25A15Q9Y619 301 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 CADP27708 2225 aa13.87□□□□□ -0.19
CTTN-212ENST00000527962 SMIM23A6NLE4 172 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 ESPNB1AK53 854 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 PMS2P2O95744 297 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 IGHV3-9P01782 118 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 FAM153BP0C7A2 387 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 HNF1AP20823 631 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 GZMKP49863 264 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 PCLAFQ15004 111 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 UGT3A2Q3SY77 523 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 FAM153CQ494X1 144 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 IL23RQ5VWK5 629 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 C17orf78Q8N4C9 275 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 ZNF525Q8N782 197 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 OR5D16Q8NGK9 328 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 OR5AK3PQ8NH89 298 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 UBLCP1Q8WVY7 318 aaPredicted RBP13.86□□□□□ -0.19
CTTN-212ENST00000527962 MUS81Q96NY9 551 aa13.86□□□□□ -0.19
CTTN-212ENST00000527962 C12orf65Q9H3J6 166 aaKnown RBP13.86□□□□□ -0.19
CTTN-212ENST00000527962 MANSC1Q9H8J5 431 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms