RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 CTHRC1Q96CG8 243 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 PEX11GQ96HA9 241 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 PTCHD1Q96NR3 888 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 ABHD1Q96SE0 405 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.22□□□□□ -0.77
HDAC9-228ENST00000524023 ABCG5Q9H222 651 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 MTIF3Q9H2K0 278 aaKnown RBP10.22□□□□□ -0.77
HDAC9-228ENST00000524023 POLE3Q9NRF9 147 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 EVA1BQ9NVM1 165 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 TICRRQ7Z2Z1 1910 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 GALR3O60755 368 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-228ENST00000524023 ADAM11O75078 769 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 FZD7O75084 574 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 SOX30O94993 753 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 NKX2-2O95096 273 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 NGFRP08138 427 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 IFI6P09912 130 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 PYCR1P32322 319 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 BTCP35070 178 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 CAPZA2P47755 286 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 NRG3P56975 720 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 ACTC1P68032 377 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 ACTA1P68133 377 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 PYHIN1Q6K0P9 492 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 MS4A15Q8N5U1 240 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 DNAJC5GQ8N7S2 189 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 BAHD1Q8TBE0 780 aaPredicted RBP10.22□□□□□ -0.77
HDAC9-228ENST00000524023 GHSRQ92847 366 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 SIPA1Q96FS4 1042 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 NECTIN4Q96NY8 510 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 ZNF426Q9BUY5 554 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 FBRSQ9HAH7 460 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 CAPN10Q9HC96 672 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 MCCC2Q9HCC0 563 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 CD93Q9NPY3 652 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 KLHL1Q9NR64 748 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 ST6GALNAC2Q9UJ37 374 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 CACNG2Q9Y698 323 aa10.22□□□□□ -0.77
HDAC9-228ENST00000524023 SMLR1H3BR10 107 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 KLF8O95600 359 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-228ENST00000524023 CBX7O95931 251 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 IFNGP01579 166 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 RAB3BP20337 219 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 SLC6A6P31641 620 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 RBM34P42696 430 aaKnown RBP10.21□□□□□ -0.77
HDAC9-228ENST00000524023 EMDP50402 254 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 SRP54P61011 504 aaKnown RBP10.21□□□□□ -0.77
HDAC9-228ENST00000524023 POU4F2Q12837 409 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 BTBD16Q32M84 506 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 LAMTOR1Q6IAA8 161 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 ARHGAP11AQ6P4F7 1023 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 ZC3H14Q6PJT7 736 aaKnown RBP10.21□□□□□ -0.77
HDAC9-228ENST00000524023 DGAT2L6Q6ZPD8 337 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 RNF44Q7L0R7 432 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 GRAMD2AQ8IUY3 354 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 RFLNBQ8N5W9 214 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 ZNF655Q8N720 491 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-228ENST00000524023 ZNF614Q8N883 585 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 OR52R1Q8NGF1 315 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 OR13C5Q8NGS8 318 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 DEDD2Q8WXF8 326 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 HOXB13Q92826 284 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-228ENST00000524023 ANKRD9Q96BM1 317 aaPredicted RBP10.21□□□□□ -0.77
HDAC9-228ENST00000524023 EVA1AQ9H8M9 152 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 SCML1Q9UN30 329 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 NCKAP1Q9Y2A7 1128 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 NPFFR2Q9Y5X5 522 aa10.21□□□□□ -0.77
HDAC9-228ENST00000524023 A0A0A6YYJ9 748 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 A0A1W2PRG6 482 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 TNFRSF10CO14798 259 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 AKR7A2O43488 359 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 ACAA2P42765 397 aaKnown RBP10.21□□□□□ -0.78
HDAC9-228ENST00000524023 SRP9P49458 86 aaKnown RBP10.21□□□□□ -0.78
HDAC9-228ENST00000524023 HCCSP53701 268 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 MRPL28Q13084 256 aaKnown RBP10.21□□□□□ -0.78
HDAC9-228ENST00000524023 NTRK2Q16620 822 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 ALG11Q2TAA5 492 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 SLC36A2Q495M3 483 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 ALG10BQ5I7T1 473 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 MANEAQ5SRI9 462 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 HACD4Q5VWC8 232 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 ANKRD54Q6NXT1 300 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 KRT74Q7RTS7 529 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 ARL14Q8N4G2 192 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 OR5H6Q8NGV6 325 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 PATE1Q8WXA2 126 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 TRIM2Q9C040 744 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 DNAJB12Q9NXW2 375 aaKnown RBP10.21□□□□□ -0.78
HDAC9-228ENST00000524023 SERTAD3Q9UJW9 196 aa10.21□□□□□ -0.78
HDAC9-228ENST00000524023 TRAV1-2A0A0B4J238 106 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.2□□□□□ -0.78
HDAC9-228ENST00000524023 C2orf74A8MZ97 194 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 OGG1O15527 345 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 OR2B3O76000 313 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 TFP02787 698 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 HNRNPA2B1P22626 353 aaKnown RBP10.2□□□□□ -0.78
HDAC9-228ENST00000524023 GNG2P59768 71 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 PSG6Q00889 435 aa10.2□□□□□ -0.78
HDAC9-228ENST00000524023 CRYZQ08257 329 aaKnown RBP10.2□□□□□ -0.78
HDAC9-228ENST00000524023 TP53I3Q53FA7 332 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms