RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 CARD18P57730 90 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 PON3Q15166 354 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 TMEM176BQ3YBM2 270 aaPredicted RBP11.25□□□□□ -0.61
CCNC-216ENST00000523961 RABL3Q5HYI8 236 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 SP5Q6BEB4 398 aaPredicted RBP11.25□□□□□ -0.61
CCNC-216ENST00000523961 DHRS4L2Q6PKH6 230 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 PLXDC2Q6UX71 529 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 PIGWQ7Z7B1 504 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 TREML1Q86YW5 311 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 LIX1LQ8IVB5 337 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 ZZZ3Q8IYH5 903 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 ATP6V1C2Q8NEY4 427 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 BHLHE22Q8NFJ8 381 aaPredicted RBP11.25□□□□□ -0.61
CCNC-216ENST00000523961 FNDC9Q8TBE3 224 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 SLC25A43Q8WUT9 341 aaPredicted RBP11.25□□□□□ -0.61
CCNC-216ENST00000523961 FIG4Q92562 907 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 OSTF1Q92882 214 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 INTS12Q96CB8 462 aaKnown RBP11.25□□□□□ -0.61
CCNC-216ENST00000523961 CMTM5Q96DZ9 223 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 ECSITQ9BQ95 431 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 SFXN3Q9BWM7 321 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 PRRG4Q9BZD6 226 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 UCK2Q9BZX2 261 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 TIGARQ9NQ88 270 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 FAM53CQ9NYF3 392 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 MCTS1Q9ULC4 181 aaKnown RBP11.25□□□□□ -0.61
CCNC-216ENST00000523961 ARL2BPQ9Y2Y0 163 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 SPIN1Q9Y657 262 aaPredicted RBP11.25□□□□□ -0.61
CCNC-216ENST00000523961 CACNA1CQ13936 2221 aa11.25□□□□□ -0.61
CCNC-216ENST00000523961 NKX2-6A6NCS4 301 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 AIM2O14862 343 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 GKN3PP0CG01 181 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 BMP5P22003 454 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 COL8A1P27658 744 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 GRNP28799 593 aaKnown RBP11.24□□□□□ -0.61
CCNC-216ENST00000523961 SHC1P29353 583 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 AQP1P29972 269 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 PRDX6P30041 224 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 PCGF2P35227 344 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 ACAA2P42765 397 aaKnown RBP11.24□□□□□ -0.61
CCNC-216ENST00000523961 SLC1A3P43003 542 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 GZMMP51124 257 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 POLR2HP52434 150 aaKnown RBP11.24□□□□□ -0.61
CCNC-216ENST00000523961 PCBP3P57721 371 aaKnown RBP11.24□□□□□ -0.61
CCNC-216ENST00000523961 COPZ1P61923 177 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 VMACQ2NL98 169 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 INTS11Q5TA45 600 aaKnown RBP11.24□□□□□ -0.61
CCNC-216ENST00000523961 POMZP3Q6PJE2 187 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 ARPINQ7Z6K5 226 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 ARMC8Q8IUR7 673 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 GCNT2Q8N0V5 402 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 RELL2Q8NC24 303 aaPredicted RBP11.24□□□□□ -0.61
CCNC-216ENST00000523961 CPNE4Q96A23 557 aaPredicted RBP11.24□□□□□ -0.61
CCNC-216ENST00000523961 EFCAB1Q9HAE3 211 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 CTPS2Q9NRF8 586 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 CHRNA9Q9UGM1 479 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 AP3M1Q9Y2T2 418 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 CHST2Q9Y4C5 530 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 DOCK7Q96N67 2140 aa11.24□□□□□ -0.61
CCNC-216ENST00000523961 KIAA1549Q9HCM3 1950 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 TMED7-TICAM2A0A0A6YYA0 188 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 MFN2O95140 757 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 TACR3P29371 465 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 CLK1P49759 484 aaKnown RBP11.23□□□□□ -0.61
CCNC-216ENST00000523961 ASCL1P50553 236 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 MAP2K6P52564 334 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 TFF3Q07654 80 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 FOXF2Q12947 444 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 SYT14P1Q58G82 188 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 HIST2H2BCQ6DN03 193 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 GTF2IRD2BQ6EKJ0 949 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 WBP2NLQ6ICG8 309 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 PPP4R4Q6NUP7 873 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 ERICH5Q6P6B1 374 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 HACD2Q6Y1H2 254 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 PATL1Q86TB9 770 aaKnown RBP11.23□□□□□ -0.61
CCNC-216ENST00000523961 GTF2IRD2Q86UP8 949 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 CALHM3Q86XJ0 350 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 ADGRG3Q86Y34 549 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 LRRC46Q96FV0 321 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 REXO5Q96IC2 774 aaKnown RBP11.23□□□□□ -0.61
CCNC-216ENST00000523961 OR5B2Q96R09 309 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 CCT8L2Q96SF2 557 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 ADAM19Q9H013 955 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 PIF1Q9H611 641 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 COQ10BQ9H8M1 238 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 EVA1AQ9H8M9 152 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 RNF122Q9H9V4 155 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 KLHL28Q9NXS3 571 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 OSGIN1Q9UJX0 560 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 SLC13A4Q9UKG4 626 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 TMED7Q9Y3B3 224 aa11.23□□□□□ -0.61
CCNC-216ENST00000523961 A0A1W2PNR3 127 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 A0A1W2PNV4 684 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 C19orf84I3L1E1 186 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 M0QX08 132 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 TPST1O60507 370 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 DCTN3O75935 186 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 AQP8O94778 261 aa11.22□□□□□ -0.61
CCNC-216ENST00000523961 FAM107AO95990 144 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms