RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 KCNE3Q9Y6H6 103 aa10.14□□□□□ -0.79
SDCBP-211ENST00000523441 TMEM89A2RUT3 159 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 CCDC151A5D8V7 595 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 TRIM77I1YAP6 450 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 HMGN2P05204 90 aaKnown RBP10.13□□□□□ -0.79
SDCBP-211ENST00000523441 PHBP35232 272 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 GSTM5P46439 218 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 CSNK2A1P68400 391 aaPredicted RBP10.13□□□□□ -0.79
SDCBP-211ENST00000523441 TP53BP2Q13625 1128 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 CBFBQ13951 182 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 MIDNQ504T8 468 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 FAHD2BQ6P2I3 314 aaPredicted RBP10.13□□□□□ -0.79
SDCBP-211ENST00000523441 DEF8Q6ZN54 512 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 MTERF4Q7Z6M4 381 aaKnown RBP10.13□□□□□ -0.79
SDCBP-211ENST00000523441 MTDHQ86UE4 582 aaKnown RBP10.13□□□□□ -0.79
SDCBP-211ENST00000523441 OR5W2Q8NH69 310 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 ARL8AQ96BM9 186 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 ZHX1-C8orf76Q96EF9 292 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 FAHD2AQ96GK7 314 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 TSSK3Q96PN8 268 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 SERINC1Q9NRX5 453 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 SLC7A10Q9NS82 523 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 CA10Q9NS85 328 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 TAS2R7Q9NYW3 318 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 TMEM216Q9P0N5 145 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 BAIAP2L1Q9UHR4 511 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 FIS1Q9Y3D6 152 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 PTGDR2Q9Y5Y4 395 aa10.13□□□□□ -0.79
SDCBP-211ENST00000523441 IGHV1-18A0A0C4DH31 117 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 ZNF716A6NP11 495 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 B9A039 149 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 FAM157AC9JC47 383 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 hCG_2039718K7EN88 272 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 ZNF264O43296 627 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 WNT11O96014 354 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 ENO1P06733 434 aaKnown RBP10.12□□□□□ -0.79
SDCBP-211ENST00000523441 GSTA1P08263 222 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 UBL4AP11441 157 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 DDX5P17844 614 aaKnown RBP10.12□□□□□ -0.79
SDCBP-211ENST00000523441 PGCP20142 388 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 IDH3GP51553 393 aaPredicted RBP10.12□□□□□ -0.79
SDCBP-211ENST00000523441 SESN3P58005 492 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 PRPS1P60891 318 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 IL1RL1Q01638 556 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 CAV1Q03135 178 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 LCP2Q13094 533 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 GPR68Q15743 365 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 SPDYE7PQ495Y7 208 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 KLHL26Q53HC5 615 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 SYT14P1Q58G82 188 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 AWAT1Q58HT5 328 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 DCST2Q5T1A1 773 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 PDZK1Q5T2W1 519 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 TSPO2Q5TGU0 170 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 ABLIM2Q6H8Q1 611 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 TMPPEQ6ZT21 453 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 SPATA21Q7Z572 469 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 WDR60Q8WVS4 1066 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 PAFAH2Q99487 392 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 C1QTNF3Q9BXJ4 246 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 OR11A1Q9GZK7 315 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 IQCGQ9H095 443 aaKnown RBP10.12□□□□□ -0.79
SDCBP-211ENST00000523441 DYNLRB1Q9NP97 96 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 HIF1ANQ9NWT6 349 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 NINJ2Q9NZG7 142 aa10.12□□□□□ -0.79
SDCBP-211ENST00000523441 A0A0A6YYJ9 748 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 SLCO1B7G3V0H7 640 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 NR5A2O00482 541 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 TMPRSS2O15393 492 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 KRT33AO76009 404 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 ERCC1P07992 297 aaPredicted RBP10.11□□□□□ -0.79
SDCBP-211ENST00000523441 UBTFL6P0CB48 400 aaPredicted RBP10.11□□□□□ -0.79
SDCBP-211ENST00000523441 RYKP34925 604 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 SLC1A3P43003 542 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 MAGEA12P43365 314 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 COMPP49747 757 aaPredicted RBP10.11□□□□□ -0.79
SDCBP-211ENST00000523441 ATP12AP54707 1039 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 DVL1P1P54792 670 aaPredicted RBP10.11□□□□□ -0.79
SDCBP-211ENST00000523441 PKNOX1P55347 436 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 SUMO3P55854 103 aaPredicted RBP10.11□□□□□ -0.79
SDCBP-211ENST00000523441 SLC7A5Q01650 507 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 ADIPOQQ15848 244 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 ADRM1Q16186 407 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 ZSWIM7Q19AV6 140 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 HMGN2P46Q86SG4 172 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 CARM1Q86X55 608 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 TMEM151AQ8N4L1 468 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 ZNF563Q8TA94 476 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 PIGXQ8TBF5 258 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 ADAMTS15Q8TE58 950 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 FAM216AQ8WUB2 273 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 ZFAND2BQ8WV99 257 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 HOXB13Q92826 284 aaPredicted RBP10.11□□□□□ -0.79
SDCBP-211ENST00000523441 FAM120BQ96EK7 910 aaKnown RBP10.11□□□□□ -0.79
SDCBP-211ENST00000523441 ARL5BQ96KC2 179 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 LRRC37BQ96QE4 947 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 SEC61A2Q9H9S3 476 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 CTPS2Q9NRF8 586 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 MALT1Q9UDY8 824 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 DTNAQ9Y4J8 743 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms