RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 FAM153CQ494X1 144 aa22.81■■□□□ 1.24
PVT1-219ENST00000523427 C9orf135Q5VTT2 229 aa22.81■■□□□ 1.24
PVT1-219ENST00000523427 TMPPEQ6ZT21 453 aa22.81■■□□□ 1.24
PVT1-219ENST00000523427 SSX8Q7RTT4 187 aa22.81■■□□□ 1.24
PVT1-219ENST00000523427 OR5P2Q8WZ92 322 aa22.81■■□□□ 1.24
PVT1-219ENST00000523427 GATA5Q9BWX5 397 aaPredicted RBP22.81■■□□□ 1.24
PVT1-219ENST00000523427 GPATCH2Q9NW75 528 aa22.81■■□□□ 1.24
PVT1-219ENST00000523427 EMC3Q9P0I2 261 aa22.81■■□□□ 1.24
PVT1-219ENST00000523427 LPAR3Q9UBY5 353 aa22.81■■□□□ 1.24
PVT1-219ENST00000523427 SLC25A15Q9Y619 301 aa22.81■■□□□ 1.24
PVT1-219ENST00000523427 SMIM23A6NLE4 172 aa22.8■■□□□ 1.24
PVT1-219ENST00000523427 ESPNB1AK53 854 aa22.8■■□□□ 1.24
PVT1-219ENST00000523427 LMX1BO60663 402 aa22.8■■□□□ 1.24
PVT1-219ENST00000523427 KRT16P08779 473 aa22.8■■□□□ 1.24
PVT1-219ENST00000523427 IGHV4-31P0DP07 118 aa22.8■■□□□ 1.24
PVT1-219ENST00000523427 SOAT1P35610 550 aa22.8■■□□□ 1.24
PVT1-219ENST00000523427 FOXG1P55316 489 aaPredicted RBP22.8■■□□□ 1.24
PVT1-219ENST00000523427 AGR3Q8TD06 166 aa22.8■■□□□ 1.24
PVT1-219ENST00000523427 C10orf105Q8TEF2 133 aa22.8■■□□□ 1.24
PVT1-219ENST00000523427 TRAF6Q9Y4K3 522 aa22.8■■□□□ 1.24
PVT1-219ENST00000523427 NUP214P35658 2090 aaPredicted RBP22.8■■□□□ 1.24
PVT1-219ENST00000523427 TMEM114B3SHH9 223 aa22.79■■□□□ 1.24
PVT1-219ENST00000523427 PIP5K1BO14986 540 aa22.79■■□□□ 1.24
PVT1-219ENST00000523427 PEX11AO75192 247 aa22.79■■□□□ 1.24
PVT1-219ENST00000523427 UBTFL6P0CB48 400 aaPredicted RBP22.79■■□□□ 1.24
PVT1-219ENST00000523427 USF1P22415 310 aaPredicted RBP22.79■■□□□ 1.24
PVT1-219ENST00000523427 CSNK2A1P68400 391 aaPredicted RBP22.79■■□□□ 1.24
PVT1-219ENST00000523427 PTGR1Q14914 329 aa22.79■■□□□ 1.24
PVT1-219ENST00000523427 KANK2Q63ZY3 851 aa22.79■■□□□ 1.24
PVT1-219ENST00000523427 LSRQ86X29 649 aaPredicted RBP22.79■■□□□ 1.24
PVT1-219ENST00000523427 TWIST2Q8WVJ9 160 aa22.79■■□□□ 1.24
PVT1-219ENST00000523427 C3orf49Q96BT1 292 aa22.79■■□□□ 1.24
PVT1-219ENST00000523427 SDF2Q99470 211 aa22.79■■□□□ 1.24
PVT1-219ENST00000523427 INPP5KQ9BT40 448 aa22.79■■□□□ 1.24
PVT1-219ENST00000523427 C1orf50Q9BV19 199 aa22.79■■□□□ 1.24
PVT1-219ENST00000523427 ASB6Q9NWX5 421 aa22.79■■□□□ 1.24
PVT1-219ENST00000523427 GOLGA8QA0A0J9YX86 632 aa22.78■■□□□ 1.24
PVT1-219ENST00000523427 CENPVL1A0A0U1RR11 272 aa22.78■■□□□ 1.24
PVT1-219ENST00000523427 GOLGA8OA6NCC3 632 aa22.78■■□□□ 1.24
PVT1-219ENST00000523427 GOLGA8NF8WBI6 632 aa22.78■■□□□ 1.24
PVT1-219ENST00000523427 COPEO14579 308 aa22.78■■□□□ 1.24
PVT1-219ENST00000523427 SRD5A1P18405 259 aa22.78■■□□□ 1.24
PVT1-219ENST00000523427 CRHR1P34998 444 aa22.78■■□□□ 1.24
PVT1-219ENST00000523427 LSM11P83369 360 aaKnown RBP eCLIP22.78■■□□□ 1.24
PVT1-219ENST00000523427 GGTLC2Q14390 218 aa22.78■■□□□ 1.24
PVT1-219ENST00000523427 LSM12Q3MHD2 195 aaKnown RBP22.78■■□□□ 1.24
PVT1-219ENST00000523427 SYT14P1Q58G82 188 aa22.78■■□□□ 1.24
PVT1-219ENST00000523427 MTDHQ86UE4 582 aaKnown RBP22.78■■□□□ 1.24
PVT1-219ENST00000523427 KRTCAP2Q8N6L1 136 aa22.78■■□□□ 1.24
PVT1-219ENST00000523427 LAT2Q9GZY6 243 aa22.78■■□□□ 1.24
PVT1-219ENST00000523427 TMEM160Q9NX00 188 aa22.78■■□□□ 1.24
PVT1-219ENST00000523427 MKLN1Q9UL63 735 aa22.78■■□□□ 1.24
PVT1-219ENST00000523427 YLPM1P49750 1951 aaKnown RBP22.78■■□□□ 1.24
PVT1-219ENST00000523427 CSTAP01040 98 aa22.77■■□□□ 1.24
PVT1-219ENST00000523427 CHRNGP07510 517 aa22.77■■□□□ 1.24
PVT1-219ENST00000523427 CCNA2P20248 432 aa22.77■■□□□ 1.24
PVT1-219ENST00000523427 NTF4P34130 210 aa22.77■■□□□ 1.24
PVT1-219ENST00000523427 RPL3P39023 403 aaKnown RBP22.77■■□□□ 1.24
PVT1-219ENST00000523427 SKP2Q13309 424 aa22.77■■□□□ 1.24
PVT1-219ENST00000523427 IFT20Q8IY31 132 aa22.77■■□□□ 1.24
PVT1-219ENST00000523427 CLEC4FQ8N1N0 589 aa22.77■■□□□ 1.24
PVT1-219ENST00000523427 OR52E4Q8NGH9 312 aa22.77■■□□□ 1.24
PVT1-219ENST00000523427 TMEM234Q8WY98 164 aa22.77■■□□□ 1.24
PVT1-219ENST00000523427 ST8SIA1Q92185 356 aa22.77■■□□□ 1.24
PVT1-219ENST00000523427 ZHX1-C8orf76Q96EF9 292 aa22.77■■□□□ 1.24
PVT1-219ENST00000523427 TAS2R16Q9NYV7 291 aa22.77■■□□□ 1.24
PVT1-219ENST00000523427 KCNE5Q9UJ90 142 aa22.77■■□□□ 1.24
PVT1-219ENST00000523427 H7C417 338 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 FCMRO60667 390 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 MRPL33O75394 65 aaKnown RBP22.76■■□□□ 1.23
PVT1-219ENST00000523427 BMP4P12644 408 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 IGFBP5P24593 272 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 MAPK1P28482 360 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 RYKP34925 604 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 EFNA4P52798 201 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 CHRNB3Q05901 458 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 CARTPTQ16568 116 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 ABLIM2Q6H8Q1 611 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 ZNF544Q6NX49 715 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 CCDC103Q8IW40 242 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 C4orf33Q8N1A6 199 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 ZNF563Q8TA94 476 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 PROX1Q92786 737 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 ACER3Q9NUN7 267 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 ATAD3AQ9NVI7 634 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 KCNS2Q9ULS6 477 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 PMF1-BGLAPU3KQ54 211 aa22.76■■□□□ 1.23
PVT1-219ENST00000523427 HEATR1Q9H583 2144 aaKnown RBP22.75■■□□□ 1.23
PVT1-219ENST00000523427 MALRD1Q5VYJ5 2156 aa22.75■■□□□ 1.23
PVT1-219ENST00000523427 SLC35F4A4IF30 521 aa22.75■■□□□ 1.23
PVT1-219ENST00000523427 ZNF716A6NP11 495 aa22.75■■□□□ 1.23
PVT1-219ENST00000523427 ETV2O00321 342 aaPredicted RBP22.75■■□□□ 1.23
PVT1-219ENST00000523427 SHBGP04278 402 aa22.75■■□□□ 1.23
PVT1-219ENST00000523427 PGCP20142 388 aa22.75■■□□□ 1.23
PVT1-219ENST00000523427 MATN1P21941 496 aa22.75■■□□□ 1.23
PVT1-219ENST00000523427 PCLAFQ15004 111 aa22.75■■□□□ 1.23
PVT1-219ENST00000523427 GABRA6Q16445 453 aa22.75■■□□□ 1.23
PVT1-219ENST00000523427 GSPT2Q8IYD1 628 aaKnown RBP22.75■■□□□ 1.23
PVT1-219ENST00000523427 FBXO17Q96EF6 278 aa22.75■■□□□ 1.23
PVT1-219ENST00000523427 ARL5BQ96KC2 179 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms