RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 TGFAP01135 160 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 PF4V1P10720 104 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 PEPDP12955 493 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 CPA3P15088 417 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 S1PR1P21453 382 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 GSTM2P28161 218 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 APOBEC3AP31941 199 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 TMED10P49755 219 aaKnown RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 CLK3P49761 638 aaKnown RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 RGS4P49798 205 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 SEC24CP53992 1094 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 GAS1P54826 345 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 ATP6V0D1P61421 351 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 ACTG1P63261 375 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 RPP38P78345 283 aaKnown RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 TNFRSF17Q02223 184 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 DLG1Q12959 904 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 SNTA1Q13424 505 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 DOC2AQ14183 400 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 GGTLC2Q14390 218 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 FGFBP1Q14512 234 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 CDKL4Q5MAI5 379 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 ATG16L1Q676U5 607 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 MFSD12Q6NUT3 480 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 METTL2BQ6P1Q9 378 aaKnown RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 C6orf89Q6UWU4 347 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 DOK3Q7L591 496 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 NUP54Q7Z3B4 507 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 CMC1Q7Z7K0 106 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 NUDCD3Q8IVD9 361 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 LRRC34Q8IZ02 419 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 GABRG1Q8N1C3 465 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 RNF175Q8N4F7 328 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 NKAPQ8N5F7 415 aaKnown RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 OR5M1Q8NGP8 315 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 BCAS4Q8TDM0 211 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 ZNF473Q8WTR7 871 aaKnown RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 SNX33Q8WV41 574 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 RNF138Q8WVD3 245 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 RIT1Q92963 219 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 OMA1Q96E52 524 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 CCDC126Q96EE4 140 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 ADAD1Q96M93 576 aaKnown RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 TBCDQ9BTW9 1192 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 MS4A8Q9BY19 250 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 ZNF717Q9BY31 904 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 IQCGQ9H095 443 aaKnown RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 MRPL46Q9H2W6 279 aaKnown RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 CXorf21Q9HAI6 301 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 THAP1Q9NVV9 213 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 KLRF1Q9NZS2 232 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 TMCO1Q9UM00 188 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 MRPS18CQ9Y3D5 142 aaKnown RBP5.83□□□□□ -1.48
SDCBP-210ENST00000522843 ZNF337Q9Y3M9 751 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 PCDHGB1Q9Y5G3 927 aa5.83□□□□□ -1.48
SDCBP-210ENST00000522843 ANKDD1BA6NHY2 528 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 GLOD5A6NK44 160 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 H7C417 338 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 WDR47O94967 919 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 GPR75O95800 540 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 SERPINE1P05121 402 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 GYPEP15421 78 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 CD1DP15813 335 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 NAGAP17050 411 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 GNAZP19086 355 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 EPORP19235 508 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 ALDH3A1P30838 453 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 IL2RGP31785 369 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 TTKP33981 857 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 GALNSP34059 522 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 NR4A2P43354 598 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 SLC12A2P55011 1212 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 CDH11P55287 796 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 SLAMF1Q13291 335 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 PCLAFQ15004 111 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 AWAT1Q58HT5 328 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 C19orf54Q5BKX5 351 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 TTC19Q6DKK2 380 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-210ENST00000522843 ZYG11AQ6WRX3 759 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 B3GLCTQ6Y288 498 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 RAPH1Q70E73 1250 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 CHMP1BQ7LBR1 199 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 CPLX4Q7Z7G2 160 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 TBC1D1Q86TI0 1168 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-210ENST00000522843 SLC22A9Q8IVM8 553 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 CMIPQ8IY22 773 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 MIER2Q8N344 545 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 METTL25Q8N6Q8 603 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 GPATCH11Q8N954 259 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 ANKRD42Q8N9B4 389 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 C17orf47Q8NEP4 570 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 STAG3L4Q8TBR4 150 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 LRRC8CQ8TDW0 803 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 FAM216AQ8WUB2 273 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 ANKRD49Q8WVL7 239 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 DYDC1Q8WWB3 177 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 TANKQ92844 425 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 PMM1Q92871 262 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 NXNL1Q96CM4 212 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 WDR34Q96EX3 536 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms