RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 NUP54Q7Z3B4 507 aa11.29□□□□□ -0.6
PABPC1-219ENST00000522387 TSPYL5Q86VY4 417 aaPredicted RBP11.29□□□□□ -0.6
PABPC1-219ENST00000522387 CADM2Q8N3J6 435 aa11.29□□□□□ -0.6
PABPC1-219ENST00000522387 OR52J3Q8NH60 311 aa11.29□□□□□ -0.6
PABPC1-219ENST00000522387 RAB2BQ8WUD1 216 aa11.29□□□□□ -0.6
PABPC1-219ENST00000522387 AMBRA1Q9C0C7 1298 aa11.29□□□□□ -0.6
PABPC1-219ENST00000522387 TOR3AQ9H497 397 aa11.29□□□□□ -0.6
PABPC1-219ENST00000522387 PROK2Q9HC23 129 aa11.29□□□□□ -0.6
PABPC1-219ENST00000522387 TP53TG5Q9Y2B4 290 aa11.29□□□□□ -0.6
PABPC1-219ENST00000522387 PCDHGA10Q9Y5H3 936 aa11.29□□□□□ -0.6
PABPC1-219ENST00000522387 CORINQ9Y5Q5 1042 aa11.29□□□□□ -0.6
PABPC1-219ENST00000522387 FUOMA2VDF0 154 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 PINLYPA6NC86 204 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 LGI1O95970 557 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 RPS4Y1P22090 263 aaKnown RBP11.28□□□□□ -0.6
PABPC1-219ENST00000522387 CRHBPP24387 322 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 PTGDSP41222 190 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 SOX8P57073 446 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 PMP22Q01453 160 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 IL1RL1Q01638 556 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 ZDHHC21Q8IVQ6 265 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 C8orf59Q8N0T1 100 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-219ENST00000522387 ARMC10Q8N2F6 343 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 OR5M1Q8NGP8 315 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 PAQR8Q8TEZ7 354 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 TRUB1Q8WWH5 349 aaKnown RBP11.28□□□□□ -0.6
PABPC1-219ENST00000522387 SGCDQ92629 289 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 NPAS1Q99742 590 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 PALMDQ9NP74 551 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 DNAJB12Q9NXW2 375 aaKnown RBP11.28□□□□□ -0.6
PABPC1-219ENST00000522387 PPP4R1LQ9P1A2 415 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 BAG5Q9UL15 447 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 ZNF451Q9Y4E5 1061 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 ZNF407Q9C0G0 2248 aa11.28□□□□□ -0.6
PABPC1-219ENST00000522387 ALG1L2C9J202 215 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 ZNF264O43296 627 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 HPRP00739 348 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 NAGAP17050 411 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 PRKAR1BP31321 381 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 UCNP55089 124 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 TPD52P55327 224 aaPredicted RBP11.27□□□□□ -0.6
PABPC1-219ENST00000522387 COL28A1Q2UY09 1125 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 IFI44LQ53G44 452 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 PRAMEF8Q5VWM4 474 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 PRAMEF7Q5VXH5 474 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 RTL4Q6ZR62 310 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 GALNT5Q7Z7M9 940 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 CHPT1Q8WUD6 406 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 HDAC2Q92769 488 aaKnown RBP11.27□□□□□ -0.6
PABPC1-219ENST00000522387 SDCCAG3Q96C92 435 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 SGCZQ96LD1 299 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 PINK1Q9BXM7 581 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 HOXD1Q9GZZ0 328 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 TSPAN10Q9H1Z9 355 aaPredicted RBP11.27□□□□□ -0.6
PABPC1-219ENST00000522387 POLE3Q9NRF9 147 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.27□□□□□ -0.6
PABPC1-219ENST00000522387 DNAJB9Q9UBS3 223 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 RPH3AQ9Y2J0 694 aaPredicted RBP11.27□□□□□ -0.6
PABPC1-219ENST00000522387 WIF1Q9Y5W5 379 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 DNAJC13O75165 2243 aa11.27□□□□□ -0.6
PABPC1-219ENST00000522387 IGSF10Q6WRI0 2623 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 MKRN2OSH3BPM6 223 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 CLPXO76031 633 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 OPN1LWP04000 364 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 RFPL3SP0C7P2 107 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 BCAP31P51572 246 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 NPTX1Q15818 432 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 TTC23Q5W5X9 447 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 GTF2IRD2BQ6EKJ0 949 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 ARSKQ6UWY0 536 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.27□□□□□ -0.61
PABPC1-219ENST00000522387 GTF2IRD2Q86UP8 949 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 SULF2Q8IWU5 870 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 SPARTQ8N0X7 666 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 WDSUB1Q8N9V3 476 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 TTC9Q92623 222 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 DSN1Q9H410 356 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 SACM1LQ9NTJ5 587 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 FAM118AQ9NWS6 357 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 KLHL28Q9NXS3 571 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 SELENONQ9NZV5 590 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 AASSQ9UDR5 926 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 TESMINQ9Y4I5 508 aa11.27□□□□□ -0.61
PABPC1-219ENST00000522387 ADAM10O14672 748 aa11.26□□□□□ -0.61
PABPC1-219ENST00000522387 MITFO75030 526 aaPredicted RBP11.26□□□□□ -0.61
PABPC1-219ENST00000522387 SULT1C4O75897 302 aa11.26□□□□□ -0.61
PABPC1-219ENST00000522387 IFNW1P05000 195 aa11.26□□□□□ -0.61
PABPC1-219ENST00000522387 THBS1P07996 1170 aa11.26□□□□□ -0.61
PABPC1-219ENST00000522387 CLK3P49761 638 aaKnown RBP11.26□□□□□ -0.61
PABPC1-219ENST00000522387 TNFSF10P50591 281 aa11.26□□□□□ -0.61
PABPC1-219ENST00000522387 MLLT10P55197 1068 aa11.26□□□□□ -0.61
PABPC1-219ENST00000522387 TSEN54Q7Z6J9 526 aaKnown RBP11.26□□□□□ -0.61
PABPC1-219ENST00000522387 P3H2Q8IVL5 708 aa11.26□□□□□ -0.61
PABPC1-219ENST00000522387 EID3Q8N140 333 aa11.26□□□□□ -0.61
PABPC1-219ENST00000522387 ZNF555Q8NEP9 628 aa11.26□□□□□ -0.61
PABPC1-219ENST00000522387 ZNF563Q8TA94 476 aa11.26□□□□□ -0.61
PABPC1-219ENST00000522387 RASSF5Q8WWW0 418 aa11.26□□□□□ -0.61
PABPC1-219ENST00000522387 HAS2Q92819 552 aa11.26□□□□□ -0.61
PABPC1-219ENST00000522387 MBOAT4Q96T53 435 aa11.26□□□□□ -0.61
PABPC1-219ENST00000522387 TRIM45Q9H8W5 580 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms