RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.39■□□□□ 0.53
SDCBP-209ENST00000522243 KLHL9Q9P2J3 617 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 PRSS50Q9UI38 385 aa18.39■□□□□ 0.53
SDCBP-209ENST00000522243 PRR14LQ5THK1 2151 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 TRPC5OSA6NMA1 111 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 ZNF814B7Z6K7 855 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 SULT2B1O00204 365 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 CYTIPO60759 359 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 GUSBP08236 651 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 IL32P24001 234 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 EDNRAP25101 427 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 PLAURQ03405 335 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 SYT14P1Q58G82 188 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 COX20Q5RI15 118 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 C20orf204Q6ZNR8 217 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 TMPPEQ6ZT21 453 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 Q71RC1 249 aaPredicted RBP18.38■□□□□ 0.53
SDCBP-209ENST00000522243 LRRC75A-AS1Q8N1F1 130 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 CNOT9Q92600 299 aaKnown RBP18.38■□□□□ 0.53
SDCBP-209ENST00000522243 C18orf12Q96KH6 178 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 ZBTB18Q99592 522 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 BCO1Q9HAY6 547 aa18.38■□□□□ 0.53
SDCBP-209ENST00000522243 ADAM11O75078 769 aa18.37■□□□□ 0.53
SDCBP-209ENST00000522243 FESP07332 822 aa18.37■□□□□ 0.53
SDCBP-209ENST00000522243 CHRM4P08173 479 aa18.37■□□□□ 0.53
SDCBP-209ENST00000522243 CCNA2P20248 432 aa18.37■□□□□ 0.53
SDCBP-209ENST00000522243 SLC9B1Q4ZJI4 515 aa18.37■□□□□ 0.53
SDCBP-209ENST00000522243 ATG16L1Q676U5 607 aa18.37■□□□□ 0.53
SDCBP-209ENST00000522243 DNAJC14Q6Y2X3 702 aaPredicted RBP18.37■□□□□ 0.53
SDCBP-209ENST00000522243 ARFGAP2Q8N6H7 521 aa18.37■□□□□ 0.53
SDCBP-209ENST00000522243 TRIML2Q8N7C3 387 aa18.37■□□□□ 0.53
SDCBP-209ENST00000522243 POM121Q96HA1 1249 aa18.37■□□□□ 0.53
SDCBP-209ENST00000522243 TACO1Q9BSH4 297 aaKnown RBP18.37■□□□□ 0.53
SDCBP-209ENST00000522243 CCDC106Q9BWC9 280 aa18.37■□□□□ 0.53
SDCBP-209ENST00000522243 HDHD5Q9BXW7 423 aa18.37■□□□□ 0.53
SDCBP-209ENST00000522243 SLC38A1Q9H2H9 487 aa18.37■□□□□ 0.53
SDCBP-209ENST00000522243 MANSC1Q9H8J5 431 aa18.37■□□□□ 0.53
SDCBP-209ENST00000522243 NKIRAS1Q9NYS0 192 aa18.37■□□□□ 0.53
SDCBP-209ENST00000522243 AP3D1O14617 1153 aa18.36■□□□□ 0.53
SDCBP-209ENST00000522243 INHBBP09529 407 aa18.36■□□□□ 0.53
SDCBP-209ENST00000522243 ADSLP30566 484 aaPredicted RBP18.36■□□□□ 0.53
SDCBP-209ENST00000522243 APOBEC1P41238 236 aaKnown RBP18.36■□□□□ 0.53
SDCBP-209ENST00000522243 OR3A2P47893 321 aa18.36■□□□□ 0.53
SDCBP-209ENST00000522243 IDH2P48735 452 aaKnown RBP18.36■□□□□ 0.53
SDCBP-209ENST00000522243 NR1H2P55055 460 aa18.36■□□□□ 0.53
SDCBP-209ENST00000522243 TAB1Q15750 504 aa18.36■□□□□ 0.53
SDCBP-209ENST00000522243 AP1ARQ63HQ0 302 aa18.36■□□□□ 0.53
SDCBP-209ENST00000522243 RAB3IL1Q8TBN0 382 aa18.36■□□□□ 0.53
SDCBP-209ENST00000522243 OIT3Q8WWZ8 545 aa18.36■□□□□ 0.53
SDCBP-209ENST00000522243 KISS1RQ969F8 398 aaPredicted RBP18.36■□□□□ 0.53
SDCBP-209ENST00000522243 ARL5BQ96KC2 179 aa18.36■□□□□ 0.53
SDCBP-209ENST00000522243 OR11A1Q9GZK7 315 aa18.36■□□□□ 0.53
SDCBP-209ENST00000522243 TMBIM4Q9HC24 238 aa18.36■□□□□ 0.53
SDCBP-209ENST00000522243 ZNF469Q96JG9 3925 aaPredicted RBP18.35■□□□□ 0.53
SDCBP-209ENST00000522243 HOXB4P17483 251 aaPredicted RBP18.35■□□□□ 0.53
SDCBP-209ENST00000522243 CSNK2A1P68400 391 aaPredicted RBP18.35■□□□□ 0.53
SDCBP-209ENST00000522243 ITGADQ13349 1161 aa18.35■□□□□ 0.53
SDCBP-209ENST00000522243 CAPRIN1Q14444 709 aaKnown RBP18.35■□□□□ 0.53
SDCBP-209ENST00000522243 LRRC74BQ6ZQY2 392 aa18.35■□□□□ 0.53
SDCBP-209ENST00000522243 BHLHA15Q7RTS1 189 aaPredicted RBP18.35■□□□□ 0.53
SDCBP-209ENST00000522243 GRINAQ7Z429 371 aa18.35■□□□□ 0.53
SDCBP-209ENST00000522243 MAVSQ7Z434 540 aa18.35■□□□□ 0.53
SDCBP-209ENST00000522243 YTHDF3Q7Z739 585 aaKnown RBP18.35■□□□□ 0.53
SDCBP-209ENST00000522243 ADGRG3Q86Y34 549 aa18.35■□□□□ 0.53
SDCBP-209ENST00000522243 SLC25A43Q8WUT9 341 aaPredicted RBP18.35■□□□□ 0.53
SDCBP-209ENST00000522243 AKAP1Q92667 903 aaKnown RBP eCLIP18.35■□□□□ 0.53
SDCBP-209ENST00000522243 ZNF75CPQ92670 426 aaPredicted RBP18.35■□□□□ 0.53
SDCBP-209ENST00000522243 TLCD1Q96CP7 247 aa18.35■□□□□ 0.53
SDCBP-209ENST00000522243 Q96MF0 132 aa18.35■□□□□ 0.53
SDCBP-209ENST00000522243 TRNT1Q96Q11 434 aaKnown RBP18.35■□□□□ 0.53
SDCBP-209ENST00000522243 SLC6A13Q9NSD5 602 aa18.35■□□□□ 0.53
SDCBP-209ENST00000522243 CHRNA9Q9UGM1 479 aa18.35■□□□□ 0.53
SDCBP-209ENST00000522243 LIPT1Q9Y234 373 aa18.35■□□□□ 0.53
SDCBP-209ENST00000522243 SPIN1Q9Y657 262 aaPredicted RBP18.35■□□□□ 0.53
SDCBP-209ENST00000522243 AGAP5A6NIR3 686 aa18.34■□□□□ 0.53
SDCBP-209ENST00000522243 SLCO1B7G3V0H7 640 aa18.34■□□□□ 0.53
SDCBP-209ENST00000522243 RFXANKO14593 260 aa18.34■□□□□ 0.53
SDCBP-209ENST00000522243 SLC22A3O75751 556 aa18.34■□□□□ 0.53
SDCBP-209ENST00000522243 LYZL6O75951 148 aa18.34■□□□□ 0.53
SDCBP-209ENST00000522243 NR2F1P10589 423 aa18.34■□□□□ 0.53
SDCBP-209ENST00000522243 ANXA11P50995 505 aaKnown RBP18.34■□□□□ 0.53
SDCBP-209ENST00000522243 SLC18A1P54219 525 aa18.34■□□□□ 0.53
SDCBP-209ENST00000522243 P2RY6Q15077 328 aa18.34■□□□□ 0.53
SDCBP-209ENST00000522243 PDCD4Q53EL6 469 aaKnown RBP18.34■□□□□ 0.53
SDCBP-209ENST00000522243 GALNT5Q7Z7M9 940 aa18.34■□□□□ 0.53
SDCBP-209ENST00000522243 ATG4DQ86TL0 474 aaPredicted RBP18.34■□□□□ 0.53
SDCBP-209ENST00000522243 BIVMQ86UB2 503 aa18.34■□□□□ 0.53
SDCBP-209ENST00000522243 ZNF100Q8IYN0 542 aa18.34■□□□□ 0.53
SDCBP-209ENST00000522243 GLB1L3Q8NCI6 653 aaPredicted RBP18.34■□□□□ 0.53
SDCBP-209ENST00000522243 WDR60Q8WVS4 1066 aa18.34■□□□□ 0.53
SDCBP-209ENST00000522243 MAELQ96JY0 434 aaKnown RBP18.34■□□□□ 0.53
SDCBP-209ENST00000522243 TMEM204Q9BSN7 226 aa18.34■□□□□ 0.53
SDCBP-209ENST00000522243 EXOSC3Q9NQT5 275 aaKnown RBP18.34■□□□□ 0.53
SDCBP-209ENST00000522243 ACANP16112 2415 aa18.34■□□□□ 0.53
SDCBP-209ENST00000522243 ZNF724A8MTY0 619 aa18.33■□□□□ 0.52
SDCBP-209ENST00000522243 HS3ST1O14792 307 aa18.33■□□□□ 0.52
SDCBP-209ENST00000522243 CLOCKO15516 846 aa18.33■□□□□ 0.52
SDCBP-209ENST00000522243 ERLIN1O75477 346 aa18.33■□□□□ 0.52
SDCBP-209ENST00000522243 IDO1P14902 403 aa18.33■□□□□ 0.52
SDCBP-209ENST00000522243 IL7RP16871 459 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms