RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 PRKAA2P54646 552 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 QPRTQ15274 297 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 MST1LQ2TV78 715 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 TIGD2Q4W5G0 525 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 SYT14P1Q58G82 188 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 EXOSC6Q5RKV6 272 aaKnown RBP10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 TMPPEQ6ZT21 453 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 MTDHQ86UE4 582 aaKnown RBP10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 PIGXQ8TBF5 258 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 ST8SIA1Q92185 356 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 CDS1Q92903 461 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 PPCDCQ96CD2 204 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 C16orf58Q96GQ5 468 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 PKNOX2Q96KN3 472 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 EGLN2Q96KS0 407 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 SOX7Q9BT81 388 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 C1QTNF6Q9BXI9 259 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 OCEL1Q9H607 264 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 MID1IP1Q9NPA3 183 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 NINJ2Q9NZG7 142 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 DTNAQ9Y4J8 743 aa10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 SPIN1Q9Y657 262 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-203ENST00000517667 NPIPA5A0A0B4J1W7 369 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 B9A039 149 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 NPIPA7E9PJI5 369 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 PDLIM1O00151 329 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 ATP8B1O43520 1251 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 DNPH1O43598 174 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 CRCPO75575 148 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 PDE5AO76074 875 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 WNT11O96014 354 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 HMGN2P05204 90 aaKnown RBP10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 ERCC1P07992 297 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 KRT16P08779 473 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 TACSTD2P09758 323 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 NPIPA8P0DM63 369 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 UBL4AP11441 157 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 DDX5P17844 614 aaKnown RBP10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 PAX7P23759 505 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 PRPH2P23942 346 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 GIFP27352 417 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 APEX1P27695 318 aaKnown RBP10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 SERPINF1P36955 418 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 PPOXP50336 477 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 SLC16A1P53985 500 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 ATP12AP54707 1039 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 FOXA1P55317 472 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 NAA20P61599 178 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 ZSWIM7Q19AV6 140 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 DCST2Q5T1A1 773 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.01□□□□□ -0.812e-7■■■■■ 35.5
TRAPPC9-203ENST00000517667 ANKRD26P1Q6NSI1 321 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 KLHL24Q6TFL4 600 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 DEF8Q6ZN54 512 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 RELL1Q8IUW5 271 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 ZNF614Q8N883 585 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 WDR31Q8NA23 367 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 NOA1Q8NC60 698 aaKnown RBP10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 SEMA6DQ8NFY4 1073 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 RFWD2Q8NHY2 731 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 DCAKDQ8WVC6 231 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 TMEM234Q8WY98 164 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 FAM120BQ96EK7 910 aaKnown RBP10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 OTUB1Q96FW1 271 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 CCT7Q99832 543 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 KCNS3Q9BQ31 491 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 PARD6BQ9BYG5 372 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 RAB1BQ9H0U4 201 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 TSPYL1Q9H0U9 437 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 REEP4Q9H6H4 257 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 ANKZF1Q9H8Y5 726 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 SLC17A5Q9NRA2 495 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 ZCCHC3Q9NUD5 404 aaKnown RBP10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 PARPBPQ9NWS1 579 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 UPB1Q9UBR1 384 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 RAB21Q9UL25 225 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 MOKQ9UQ07 419 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 PCDHB14Q9Y5E9 798 aa10.01□□□□□ -0.81
TRAPPC9-203ENST00000517667 LRP5LA4QPB2 252 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 SEC22BO75396 215 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 VENTXO95231 258 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 PMS2P2O95744 297 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 SNRPAP09012 282 aaKnown RBP10□□□□□ -0.81
TRAPPC9-203ENST00000517667 FKBP2P26885 142 aaKnown RBP10□□□□□ -0.81
TRAPPC9-203ENST00000517667 MAGEA8P43361 318 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 RNF144AP50876 292 aaPredicted RBP10□□□□□ -0.81
TRAPPC9-203ENST00000517667 IDH3GP51553 393 aaPredicted RBP10□□□□□ -0.81
TRAPPC9-203ENST00000517667 DVL1P1P54792 670 aaPredicted RBP10□□□□□ -0.81
TRAPPC9-203ENST00000517667 CDH15P55291 814 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 PRPS1P60891 318 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 PDE7AQ13946 482 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 LASP1Q14847 261 aaKnown RBP10□□□□□ -0.81
TRAPPC9-203ENST00000517667 CDC73Q6P1J9 531 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 RINLQ6ZS11 566 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 ANKS4BQ8N8V4 417 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 ADAMTS15Q8TE58 950 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 MTERF3Q96E29 417 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 ACTRT3Q9BYD9 372 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 SAP130Q9H0E3 1048 aa10□□□□□ -0.81
TRAPPC9-203ENST00000517667 GSTO2Q9H4Y5 243 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms