RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 NETO1Q8TDF5 533 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 MRGPRDQ8TDS7 321 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 SORCS1Q8WY21 1168 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 TM9SF4Q92544 642 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 IRF7Q92985 503 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 C3orf49Q96BT1 292 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 CMTM7Q96FZ5 175 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 CHRDQ9H2X0 955 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 METTL8Q9H825 291 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 LANCL2Q9NS86 450 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 DCAF13Q9NV06 445 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 TRPC4Q9UBN4 977 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 CHRNA9Q9UGM1 479 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 A0A1B0GVC2 190 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 A0A1W2PPC1 479 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 FAM86C2PA6NEL3 165 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 D6RAR5 112 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 XPNPEP2O43895 674 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 SCN2BO60939 215 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 CA11O75493 328 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 LEFTY1O75610 366 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 SIX6O95475 246 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 HPRP00739 348 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 NME1P15531 152 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 HIST1H1BP16401 226 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 AGXTP21549 392 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 ITPKAP23677 461 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 PIGAP37287 484 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 CAPZBP47756 277 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 FGF8P55075 233 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 WNT3P56703 355 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 SELENOVP59797 346 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 PDZK1IP1Q13113 114 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 MTAPQ13126 283 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 HNF4GQ14541 408 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF630Q2M218 657 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF658BQ4V348 819 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 PLA1AQ53H76 456 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 LAIR2Q6ISS4 152 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 Q6ZVL8 140 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 AHSA2Q719I0 299 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 KANSL1Q7Z3B3 1105 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 MAML2Q8IZL2 1156 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 THAP6Q8TBB0 222 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 EXTL1Q92935 676 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 TSSK3Q96PN8 268 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 SLC38A2Q96QD8 506 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 VPS25Q9BRG1 176 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF2Q9BSG1 426 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 AMBRA1Q9C0C7 1298 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 MTG2Q9H4K7 406 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 SPHK2Q9NRA0 654 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 SLC35D1Q9NTN3 355 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 PTTG3PQ9NZH4 202 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 TRAPPC4Q9Y296 219 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 PRRC2BQ5JSZ5 2229 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 UPK3BL1B0FP48 263 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 UPK3BL2E5RIL1 263 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 NPIPA2E9PIF3 369 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 GPR31O00270 319 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 SLCO2B1O94956 709 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 IGHEP01854 428 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 MYOGP15173 224 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 RHCEP18577 417 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 CEACAM8P31997 349 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 VIPR1P32241 457 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 RAB5CP51148 216 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 CHRNB3Q05901 458 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 CRYZQ08257 329 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 RSU1Q15404 277 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 CNN3Q15417 329 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 CCSMST1Q4G0I0 132 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 CES5AQ6NT32 575 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF687Q8N1G0 1237 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 GHDCQ8N2G8 530 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 FAM160A2Q8N612 972 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 LILRA3Q8N6C8 439 aaPredicted RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 ZNF614Q8N883 585 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 SETD9Q8NE22 299 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 FAM46DQ8NEK8 389 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 CD300LFQ8TDQ1 290 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 CYB5D2Q8WUJ1 264 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 CORO2AQ92828 525 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 BOD1Q96IK1 185 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 OR4K3Q96R72 315 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 RNF32Q9H0A6 362 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 ATG10Q9H0Y0 220 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 EPHX3Q9H6B9 360 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 NEUROD4Q9HD90 331 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 GULP1Q9UBP9 304 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 MRTO4Q9UKD2 239 aaKnown RBP6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 UNC80Q8N2C7 3258 aa6.95□□□□□ -1.3
PDLIM5-219ENST00000514743 TCRBV21S2A2A0A5A6 115 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 YY2O15391 372 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 MBTPS2O43462 519 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 GPRIN2O60269 458 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 SCELO95171 688 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 SEMG1P04279 462 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 SERPINA5P05154 406 aa6.94□□□□□ -1.3
PDLIM5-219ENST00000514743 CD2P06729 351 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms