RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	TM7SF2	O76062	418 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	ANXA8	P13928	327 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	HNF1A	P20823	631 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	DPP4	P27487	766 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	RPL4	P36578	427 aa	Known RBP	2.55	□□□□□ -2
MATR3-223	ENST00000514402	OR1G1	P47890	313 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	CAV2	P51636	162 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	TIMM10	P62072	90 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	CBX1	P83916	185 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	TLE4	Q04727	773 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	SELPLG	Q14242	412 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	HADH	Q16836	314 aa	Known RBP	2.55	□□□□□ -2
MATR3-223	ENST00000514402	LRRC36	Q1X8D7	754 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	ANXA8L1	Q5VT79	327 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	PRAMEF20	Q5VT98	475 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	BLOC1S2	Q6QNY1	142 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	CBLN3	Q6UW01	205 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	P4HA3	Q7Z4N8	544 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	NANOGNB	Q7Z5D8	188 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	LHFPL4	Q7Z7J7	247 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	CCDC36	Q8IYA8	594 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	BBOF1	Q8ND07	529 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	OR52K1	Q8NGK4	314 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	WDR36	Q8NI36	951 aa	Known RBP	2.55	□□□□□ -2
MATR3-223	ENST00000514402	PNPT1	Q8TCS8	783 aa	Known RBP	2.55	□□□□□ -2
MATR3-223	ENST00000514402	GIPC3	Q8TF64	312 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	SLC41A3	Q96GZ6	507 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	PIK3R4	Q99570	1358 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	BCL7B	Q9BQE9	202 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	CRNKL1	Q9BZJ0	848 aa	Known RBP	2.55	□□□□□ -2
MATR3-223	ENST00000514402	OR51J1	Q9H342	316 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	FN3KRP	Q9HA64	309 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	APMAP	Q9HDC9	416 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	GDAP2	Q9NXN4	497 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	SPRR3	Q9UBC9	169 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	GHRL	Q9UBU3	117 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	BCAP29	Q9UHQ4	241 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	CFAP45	Q9UL16	551 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	SAMD4A	Q9UPU9	718 aa	Known RBP	2.55	□□□□□ -2
MATR3-223	ENST00000514402	CHTOP	Q9Y3Y2	248 aa	Known RBP	2.55	□□□□□ -2
MATR3-223	ENST00000514402	PARD3	Q8TEW0	1356 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	IGKV6-21	A0A0C4DH24	114 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402		A0A1B0GUA9	196 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	UFL1	O94874	794 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	TIMP1	P01033	207 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	NCF2	P19878	526 aa	Predicted RBP	2.54	□□□□□ -2
MATR3-223	ENST00000514402	CCT6A	P40227	531 aa	Known RBP	2.54	□□□□□ -2
MATR3-223	ENST00000514402	MRPS6	P82932	125 aa	Known RBP	2.54	□□□□□ -2
MATR3-223	ENST00000514402	SRY	Q05066	204 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	LRRC63	Q05C16	580 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	EBI3	Q14213	229 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	PDK3	Q15120	406 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	DPYSL2	Q16555	572 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	PHYHD1	Q5SRE7	291 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	NIPAL3	Q6P499	406 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	LRRC8B	Q6P9F7	803 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	ZNF562	Q6V9R5	426 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	SYT10	Q6XYQ8	523 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	STAC2	Q6ZMT1	411 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	FAM228A	Q86W67	206 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	IFNE	Q86WN2	208 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	C17orf82	Q86X59	251 aa	Predicted RBP	2.54	□□□□□ -2
MATR3-223	ENST00000514402	PSTK	Q8IV42	348 aa	Known RBP	2.54	□□□□□ -2
MATR3-223	ENST00000514402	PDCL2	Q8N4E4	241 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	ZNF433	Q8N7K0	673 aa	Predicted RBP	2.54	□□□□□ -2
MATR3-223	ENST00000514402	OR9A1P	Q8NGU1	263 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	PEX13	Q92968	403 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	TADA1	Q96BN2	335 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	HAVCR1	Q96D42	359 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	RBM14	Q96PK6	669 aa	Known RBP	2.54	□□□□□ -2
MATR3-223	ENST00000514402	WRAP53	Q9BUR4	548 aa	Known RBP	2.54	□□□□□ -2
MATR3-223	ENST00000514402	PKIB	Q9C010	78 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	FAM192A	Q9GZU8	254 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	MAGT1	Q9H0U3	335 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	GLIPR2	Q9H4G4	154 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	RPAP3	Q9H6T3	665 aa	Predicted RBP	2.54	□□□□□ -2
MATR3-223	ENST00000514402	C6orf203	Q9P0P8	240 aa	Predicted RBP	2.54	□□□□□ -2
MATR3-223	ENST00000514402	P2RX2	Q9UBL9	471 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	NEU3	Q9UQ49	428 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	EIF3L	Q9Y262	564 aa	Known RBP	2.54	□□□□□ -2
MATR3-223	ENST00000514402	GTF3C1	Q12789	2109 aa		2.54	□□□□□ -2
MATR3-223	ENST00000514402	ARID1A	O14497	2285 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	MET	P08581	1390 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	TNIK	Q9UKE5	1360 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	MROH5	Q6ZUA9	1318 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	PHLPP2	Q6ZVD8	1323 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	MBLAC1	A4D2B0	266 aa	Predicted RBP	2.53	□□□□□ -2
MATR3-223	ENST00000514402		M0QX08	132 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	ABCD4	O14678	606 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	ALOX15B	O15296	676 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	CTAG2	O75638	210 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	JCHAIN	P01591	159 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	CSF2	P04141	144 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	POLR2M	P0CAP2	368 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	UQCRC2	P22695	453 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	AXL	P30530	894 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	GRIA1	P42261	906 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	ETV1	P50549	477 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	BST1	Q10588	318 aa		2.53	□□□□□ -2
MATR3-223	ENST00000514402	SRSF5	Q13243	272 aa	Known RBP	2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms