RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 ZNF208O43345 1280 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 FZD7O75084 574 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 GCM2O75603 506 aaPredicted RBP8.67□□□□□ -1.02
RNF4-221ENST00000513643 CTAG2O75638 210 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 NUDT14O95848 222 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 BCHEP06276 602 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 HIVEP1P15822 2718 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 IL7RP16871 459 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 NCF2P19878 526 aaPredicted RBP8.67□□□□□ -1.02
RNF4-221ENST00000513643 ME2P23368 584 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 ADSLP30566 484 aaPredicted RBP8.67□□□□□ -1.02
RNF4-221ENST00000513643 SLC1A3P43003 542 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 PCBP3P57721 371 aaKnown RBP8.67□□□□□ -1.02
RNF4-221ENST00000513643 HPCAP84074 193 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 H3F3AP84243 136 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 TLE4Q04727 773 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 GNA13Q14344 377 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 LIN52Q52LA3 116 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 COQ5Q5HYK3 327 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 RPS26P11Q5JNZ5 115 aaPredicted RBP8.67□□□□□ -1.02
RNF4-221ENST00000513643 PDSS1Q5T2R2 415 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 C3orf33Q6P1S2 294 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 ZNF836Q6ZNA1 936 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 TMPPEQ6ZT21 453 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 NET1Q7Z628 596 aaPredicted RBP8.67□□□□□ -1.02
RNF4-221ENST00000513643 KIF18BQ86Y91 864 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 PTOV1Q86YD1 416 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 PEX5LQ8IYB4 626 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 ZNF440Q8IYI8 595 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 OR6K3Q8NGY3 331 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 WDR60Q8WVS4 1066 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 SMPDL3BQ92485 455 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 LURAP1Q96LR2 239 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 CGREF1Q99674 301 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 SPATA9Q9BWV2 254 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 RBM24Q9BX46 236 aaKnown RBP8.67□□□□□ -1.02
RNF4-221ENST00000513643 BCO1Q9HAY6 547 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 CTPS2Q9NRF8 586 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 MRGBPQ9NV56 204 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 GALNT8Q9NY28 637 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 KLHL14Q9P2G3 628 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 OSGIN1Q9UJX0 560 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 MCTS1Q9ULC4 181 aaKnown RBP8.67□□□□□ -1.02
RNF4-221ENST00000513643 IFT52Q9Y366 437 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 NDUFAF1Q9Y375 327 aa8.67□□□□□ -1.02
RNF4-221ENST00000513643 ANKRD17O75179 2603 aaKnown RBP8.67□□□□□ -1.02
RNF4-221ENST00000513643 CFAP73A6NFT4 308 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 FXYD1O00168 92 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 SMAD9O15198 467 aaKnown RBP8.66□□□□□ -1.02
RNF4-221ENST00000513643 SLC22A2O15244 555 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 DNPH1O43598 174 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 CYTIPO60759 359 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 NPIPB7O75200 414 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 CYP7B1O75881 506 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 PABPC4LP0CB38 370 aaKnown RBP8.66□□□□□ -1.02
RNF4-221ENST00000513643 EPXP11678 715 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 PRG2P13727 222 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 ENPP1P22413 925 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 PRKAR1BP31321 381 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 UQCRC1P31930 480 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 SFTPDP35247 375 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 KIR2DL3P43628 341 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 HTR3AP46098 478 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 IDH2P48735 452 aaKnown RBP8.66□□□□□ -1.02
RNF4-221ENST00000513643 ARFIP2P53365 341 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 CDK6Q00534 326 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 FAM27E3Q08E93 113 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 MERTKQ12866 999 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 KLF10Q13118 480 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 SNTB1Q13884 538 aaKnown RBP8.66□□□□□ -1.02
RNF4-221ENST00000513643 SELPLGQ14242 412 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 PDK3Q15120 406 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 RNPS1Q15287 305 aaKnown RBP8.66□□□□□ -1.02
RNF4-221ENST00000513643 SGCBQ16585 318 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 HSP90B2PQ58FF3 399 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 SYT14P1Q58G82 188 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 REEP3Q6NUK4 255 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 DHRS4L2Q6PKH6 230 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 C22orf34Q6ZV56 151 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 P4HA3Q7Z4N8 544 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 COMTD1Q86VU5 262 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 ZNF610Q8N9Z0 462 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 BBS10Q8TAM1 723 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 SLC25A43Q8WUT9 341 aaPredicted RBP8.66□□□□□ -1.02
RNF4-221ENST00000513643 C10orf82Q8WW14 230 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 ROBO4Q8WZ75 1007 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 LRRC46Q96FV0 321 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 DACH2Q96NX9 599 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 OPN3Q9H1Y3 402 aaPredicted RBP8.66□□□□□ -1.02
RNF4-221ENST00000513643 KAT8Q9H7Z6 458 aaKnown RBP8.66□□□□□ -1.02
RNF4-221ENST00000513643 TIGARQ9NQ88 270 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 ELOVL5Q9NYP7 299 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 CHRNA9Q9UGM1 479 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 CORO2BQ9UQ03 480 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 TRAPPC4Q9Y296 219 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 ZNF443Q9Y2A4 671 aaPredicted RBP8.66□□□□□ -1.02
RNF4-221ENST00000513643 HDGFL3Q9Y3E1 203 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 ROS1P08922 2347 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 FREM1Q5H8C1 2179 aa8.66□□□□□ -1.02
RNF4-221ENST00000513643 PRR14LQ5THK1 2151 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms