RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 CC2D2AQ9P2K1 1620 aa3.77□□□□□ -1.81
CHD1-209ENST00000512844 PCF11O94913 1555 aaKnown RBP3.76□□□□□ -1.81
CHD1-209ENST00000512844 PRDM2Q13029 1718 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 KIF21AQ7Z4S6 1674 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 NCOA2Q15596 1464 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 E9PLD3 99 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 K7ERQ8 282 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 PPIHO43447 177 aaKnown RBP3.76□□□□□ -1.81
CHD1-209ENST00000512844 ZNF254O75437 659 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 TOXO94900 526 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 FGFR1OPO95684 399 aaKnown RBP3.76□□□□□ -1.81
CHD1-209ENST00000512844 HSPB1P04792 205 aaKnown RBP3.76□□□□□ -1.81
CHD1-209ENST00000512844 UGT2B4P06133 528 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 ASNSP08243 561 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 TROVE2P10155 538 aaKnown RBP eCLIP3.76□□□□□ -1.81
CHD1-209ENST00000512844 CYP11B1P15538 503 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 ZNF3P17036 446 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 HTR2AP28223 471 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 PTPN6P29350 595 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 TAGLN2P37802 199 aaKnown RBP3.76□□□□□ -1.81
CHD1-209ENST00000512844 SYKP43405 635 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 AIF1P55008 147 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 OSTNP61366 133 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 UBE2V2Q15819 145 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 TATDN3Q17R31 274 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 TEX44Q53QW1 395 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 CARD17Q5XLA6 110 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 PDPK2PQ6A1A2 396 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 TTC19Q6DKK2 380 aaPredicted RBP3.76□□□□□ -1.81
CHD1-209ENST00000512844 LEG1Q6P5S2 330 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 PAQR9Q6ZVX9 377 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 CENPQQ7L2Z9 268 aaPredicted RBP3.76□□□□□ -1.81
CHD1-209ENST00000512844 TMEM179BQ7Z7N9 219 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 C9orf40Q8IXQ3 194 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 CSNK1A1LQ8N752 337 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 ZNF564Q8TBZ8 553 aaPredicted RBP3.76□□□□□ -1.81
CHD1-209ENST00000512844 MCUR1Q96AQ8 359 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 C16orf74Q96GX8 76 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 C7orf34Q96L11 122 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 CNPY3Q9BT09 278 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 CHRAC1Q9NRG0 131 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 CHMP5Q9NZZ3 219 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 TMEM9Q9P0T7 183 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 KIAA1257Q9ULG3 409 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 AP4B1Q9Y6B7 739 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 MYOM3Q5VTT5 1437 aa3.76□□□□□ -1.81
CHD1-209ENST00000512844 SMG6Q86US8 1419 aaKnown RBP3.76□□□□□ -1.81
CHD1-209ENST00000512844 HECW1Q76N89 1606 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 PTPN23Q9H3S7 1636 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 FBLL1A6NHQ2 334 aaKnown RBP3.75□□□□□ -1.81
CHD1-209ENST00000512844 DHRS7CA6NNS2 312 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 LGALS8O00214 317 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 OR7A17O14581 309 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 ALOX15BO15296 676 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 RAMP1O60894 148 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 VPS26AO75436 327 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 ECI2O75521 394 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 GSTT2P0CG29 244 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 GSTT2BP0CG30 244 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 CLUP10909 449 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 TSPAN8P19075 237 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 CD1BP29016 333 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 CHI3L1P36222 383 aaPredicted RBP3.75□□□□□ -1.81
CHD1-209ENST00000512844 HTR5AP47898 357 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 STARP49675 285 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 HLCSP50747 726 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 UBE2HP62256 183 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 TPM4P67936 248 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 PLOD1Q02809 727 aaPredicted RBP3.75□□□□□ -1.81
CHD1-209ENST00000512844 CSTF1Q05048 431 aaKnown RBP3.75□□□□□ -1.81
CHD1-209ENST00000512844 USH1GQ495M9 461 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 SBK1Q52WX2 424 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 SPANXN2Q5MJ10 180 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 ZNF544Q6NX49 715 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 LRRC8BQ6P9F7 803 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 ZNF562Q6V9R5 426 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 HACD2Q6Y1H2 254 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 SYCE1Q8N0S2 351 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 COMMD1Q8N668 190 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 STKLD1Q8NE28 680 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 OR52B4Q8NGK2 314 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 SLC2A14Q8TDB8 520 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 MARC2Q969Z3 335 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 PINX1Q96BK5 328 aaKnown RBP3.75□□□□□ -1.81
CHD1-209ENST00000512844 SLC25A38Q96DW6 304 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 NUS1Q96E22 293 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 EDEM2Q9BV94 578 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 PTGES2Q9H7Z7 377 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 WDR76Q9H967 626 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 ROPN1Q9HAT0 212 aaPredicted RBP3.75□□□□□ -1.81
CHD1-209ENST00000512844 PNO1Q9NRX1 252 aaKnown RBP3.75□□□□□ -1.81
CHD1-209ENST00000512844 PLSCR3Q9NRY6 295 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 KLHL28Q9NXS3 571 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 SPATA7Q9P0W8 599 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 ATXN10Q9UBB4 475 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 GALPQ9UBC7 116 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 ANGPTL2Q9UKU9 493 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.75□□□□□ -1.81
CHD1-209ENST00000512844 MIA2Q96PC5 1412 aa3.75□□□□□ -1.81
CHD1-209ENST00000512844 SUPT6HQ7KZ85 1726 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms