RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 PPIAL4AQ9Y536 164 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 PCDHGA11Q9Y5H2 935 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 DNAJC15Q9Y5T4 150 aa7.96□□□□□ -1.14
NUP54-211ENST00000512151 IGLV3-32A0A0A0MS00 114 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 B4DSR2 109 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 LYNX1G3V0Z9 82 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 EDF1O60869 148 aaKnown RBP7.95□□□□□ -1.14
NUP54-211ENST00000512151 RAD51DO75771 328 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 YES1P07947 543 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 LYNX1P0DP58 116 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 KITP10721 976 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 HMOX2P30519 316 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 KRT20P35900 424 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 RPL14P50914 215 aaKnown RBP7.95□□□□□ -1.14
NUP54-211ENST00000512151 ARFIP1P53367 373 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 FOXG1P55316 489 aaPredicted RBP7.95□□□□□ -1.14
NUP54-211ENST00000512151 CARD18P57730 90 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 RAC1P63000 192 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 BTKQ06187 659 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 SCGB2A2Q13296 93 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 RIN1Q13671 783 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 MLC1Q15049 377 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 RNPS1Q15287 305 aaKnown RBP7.95□□□□□ -1.14
NUP54-211ENST00000512151 ZNF628Q5EBL2 1059 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 FRG2Q64ET8 278 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 GTF2IRD2BQ6EKJ0 949 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 CGB2Q6NT52 195 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 SLC48A1Q6P1K1 146 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 KLHL17Q6TDP4 642 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 ESPNLQ6ZVH7 1005 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 SLC46A3Q7Z3Q1 461 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 MAVSQ7Z434 540 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 GTF2IRD2Q86UP8 949 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 P2RY8Q86VZ1 359 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 NUDT13Q86X67 352 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 OR2T11Q8NH01 316 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 TWIST2Q8WVJ9 160 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 SELENOMQ8WWX9 145 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 CNRIP1Q96F85 164 aaPredicted RBP7.95□□□□□ -1.14
NUP54-211ENST00000512151 RNF145Q96MT1 663 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 C7orf26Q96N11 449 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 ZNF681Q96N22 645 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 FRG2BQ96QU4 278 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 CENPKQ9BS16 269 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 SAP130Q9H0E3 1048 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 ACSS1Q9NUB1 689 aaPredicted RBP7.95□□□□□ -1.14
NUP54-211ENST00000512151 PDP1Q9P0J1 537 aaPredicted RBP7.95□□□□□ -1.14
NUP54-211ENST00000512151 MARCOQ9UEW3 520 aaPredicted RBP7.95□□□□□ -1.14
NUP54-211ENST00000512151 PCDHA9Q9Y5H5 950 aa7.95□□□□□ -1.14
NUP54-211ENST00000512151 IGHV3-15A0A0B4J1V0 119 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 SERTM1A2A2V5 107 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 FOXE1O00358 373 aaPredicted RBP7.94□□□□□ -1.14
NUP54-211ENST00000512151 PIP5K1BO14986 540 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 NDUFB5O43674 189 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 EFNA2O43921 213 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 ULK1O75385 1050 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 SKAP2O75563 359 aaPredicted RBP7.94□□□□□ -1.14
NUP54-211ENST00000512151 KLK1P06870 262 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 LINC00032P0C843 101 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 DAOP14920 347 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 CSNK2A2P19784 350 aaPredicted RBP7.94□□□□□ -1.14
NUP54-211ENST00000512151 ENPP1P22413 925 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 PTX3P26022 381 aaPredicted RBP7.94□□□□□ -1.14
NUP54-211ENST00000512151 SFTPDP35247 375 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 MANFP55145 182 aaKnown RBP7.94□□□□□ -1.14
NUP54-211ENST00000512151 SLC25A3Q00325 362 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 CSTF3Q12996 717 aaKnown RBP7.94□□□□□ -1.14
NUP54-211ENST00000512151 FCRLAQ7L513 359 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 CARM1Q86X55 608 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 ZCCHC24Q8N2G6 241 aaKnown RBP7.94□□□□□ -1.14
NUP54-211ENST00000512151 WDR31Q8NA23 367 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 CCDC197Q8NCU1 140 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 SLC9A6Q92581 669 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 THOC1Q96FV9 657 aaKnown RBP7.94□□□□□ -1.14
NUP54-211ENST00000512151 KLHL15Q96M94 604 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 DUX5Q96PT3 197 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 LRRC37BQ96QE4 947 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 ZNF300Q96RE9 604 aaPredicted RBP7.94□□□□□ -1.14
NUP54-211ENST00000512151 ACPTQ9BZG2 426 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 SDHAF3Q9NRP4 125 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 FAM120CQ9NX05 1096 aaKnown RBP7.94□□□□□ -1.14
NUP54-211ENST00000512151 GIMAP2Q9UG22 337 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 SNX6Q9UNH7 406 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 ABCG2Q9UNQ0 655 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 WNK2Q9Y3S1 2297 aa7.94□□□□□ -1.14
NUP54-211ENST00000512151 A0A1W2PRB8 838 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 WNT9BO14905 357 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 CRCPO75575 148 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 PRKD3O94806 890 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 SNUPNO95149 360 aaKnown RBP7.93□□□□□ -1.14
NUP54-211ENST00000512151 IGHV3-9P01782 118 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 KRT6AP02538 564 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 KRT6BP04259 564 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 MSMBP08118 114 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 VIMP08670 466 aaKnown RBP7.93□□□□□ -1.14
NUP54-211ENST00000512151 IGFBP1P08833 259 aaPredicted RBP7.93□□□□□ -1.14
NUP54-211ENST00000512151 PABPC4LP0CB38 370 aaKnown RBP7.93□□□□□ -1.14
NUP54-211ENST00000512151 ADRA2CP18825 462 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 KRT6CP48668 564 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 SNRPD2P62316 118 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms